RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 KIF5AQ12840 1032 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 TEX44Q53QW1 395 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 HES3Q5TGS1 186 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 RAET1GQ6H3X3 334 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 ZCCHC8Q6NZY4 707 aaKnown RBP16.7■□□□□ 0.26
BRF1-219ENST00000551787 HEATR4Q86WZ0 1026 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 GALNT15Q8N3T1 639 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 LRRC57Q8N9N7 239 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 FAM181AQ8N9Y4 354 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 OR56A4Q8NGH8 313 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 ATL2Q8NHH9 583 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 AP2M1Q96CW1 435 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 IMP4Q96G21 291 aaKnown RBP16.7■□□□□ 0.26
BRF1-219ENST00000551787 TEKT5Q96M29 485 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 AGAP2Q99490 1192 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 FAM118BQ9BPY3 351 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 GLOD4Q9HC38 313 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 CYP4F12Q9HCS2 524 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 DOLKQ9UPQ8 538 aa16.7■□□□□ 0.26
BRF1-219ENST00000551787 COL5A1P20908 1838 aaPredicted RBP16.7■□□□□ 0.26
BRF1-219ENST00000551787 C1orf232A0A0U1RR37 186 aa16.69■□□□□ 0.26
BRF1-219ENST00000551787 CAPN8A6NHC0 703 aa16.69■□□□□ 0.26
BRF1-219ENST00000551787 TPP1O14773 563 aa16.69■□□□□ 0.26
BRF1-219ENST00000551787 PMPCBO75439 489 aa16.69■□□□□ 0.26
BRF1-219ENST00000551787 KIAA1024LP59773 190 aa16.69■□□□□ 0.26
BRF1-219ENST00000551787 RPL26P61254 145 aaKnown RBP16.69■□□□□ 0.26
BRF1-219ENST00000551787 TARDBPQ13148 414 aaKnown RBP eCLIP16.69■□□□□ 0.261e-10■■■■■ 33.4
BRF1-219ENST00000551787 ILKQ13418 452 aa16.69■□□□□ 0.26
BRF1-219ENST00000551787 ELOCQ15369 112 aa16.69■□□□□ 0.26
BRF1-219ENST00000551787 BBS12Q6ZW61 710 aa16.69■□□□□ 0.26
BRF1-219ENST00000551787 TMPRSS12Q86WS5 348 aa16.69■□□□□ 0.26
BRF1-219ENST00000551787 ALG3Q92685 438 aa16.69■□□□□ 0.26
BRF1-219ENST00000551787 MLPHQ9BV36 600 aaPredicted RBP16.69■□□□□ 0.26
BRF1-219ENST00000551787 RIOK2Q9BVS4 552 aaKnown RBP16.69■□□□□ 0.26
BRF1-219ENST00000551787 ADGRE3Q9BY15 652 aa16.69■□□□□ 0.26
BRF1-219ENST00000551787 OSBPL8Q9BZF1 889 aa16.69■□□□□ 0.26
BRF1-219ENST00000551787 TMEM168Q9H0V1 697 aa16.69■□□□□ 0.26
BRF1-219ENST00000551787 SIRPGQ9P1W8 387 aa16.69■□□□□ 0.26
BRF1-219ENST00000551787 GULP1Q9UBP9 304 aa16.69■□□□□ 0.26
BRF1-219ENST00000551787 PACSIN2Q9UNF0 486 aaPredicted RBP16.69■□□□□ 0.26
BRF1-219ENST00000551787 RPL26L1Q9UNX3 145 aaKnown RBP16.69■□□□□ 0.26
BRF1-219ENST00000551787 TRABD2BA6NFA1 517 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 GOLGA6L6A8MZA4 724 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 H7C0C1 242 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 PSMD11O00231 422 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 FTCDO95954 541 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 FUCA1P04066 466 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 HOXC4P09017 264 aaPredicted RBP16.68■□□□□ 0.26
BRF1-219ENST00000551787 PYGMP11217 842 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 MYCLP1P12525 358 aaPredicted RBP16.68■□□□□ 0.26
BRF1-219ENST00000551787 CTNNA2P26232 953 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 CD68P34810 354 aaPredicted RBP16.68■□□□□ 0.26
BRF1-219ENST00000551787 GPR1P46091 355 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 ATP5OP48047 213 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 STC1P52823 247 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 RWDD2BP57060 319 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 CDK3Q00526 305 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 INSM1Q01101 510 aaPredicted RBP16.68■□□□□ 0.26
BRF1-219ENST00000551787 PPP2R5EQ16537 467 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 GUSBP11Q6P575 273 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 DOK6Q6PKX4 331 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 EFL1Q7Z2Z2 1120 aaKnown RBP16.68■□□□□ 0.26
BRF1-219ENST00000551787 PEX26Q7Z412 305 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 TRIM74Q86UV6 250 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 SLC35F3Q8IY50 421 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 FSTL5Q8N475 847 aaPredicted RBP16.68■□□□□ 0.26
BRF1-219ENST00000551787 MDM1Q8TC05 714 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 IFI44Q8TCB0 444 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 PTCD2Q8WV60 388 aaKnown RBP16.68■□□□□ 0.26
BRF1-219ENST00000551787 CALR3Q96L12 384 aaKnown RBP16.68■□□□□ 0.26
BRF1-219ENST00000551787 TRIB3Q96RU7 358 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 TEX101Q9BY14 249 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 PHPT1Q9NRX4 125 aaPredicted RBP16.68■□□□□ 0.26
BRF1-219ENST00000551787 KLHL8Q9P2G9 620 aaPredicted RBP16.68■□□□□ 0.26
BRF1-219ENST00000551787 AMFRQ9UKV5 643 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 SHOC2Q9UQ13 582 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 TMEM98Q9Y2Y6 226 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 DGKBQ9Y6T7 804 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 DMXL2Q8TDJ6 3036 aa16.68■□□□□ 0.26
BRF1-219ENST00000551787 PLXNB3Q9ULL4 1909 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 CCDC66A2RUB6 948 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 CASC3O15234 703 aaKnown RBP16.67■□□□□ 0.26
BRF1-219ENST00000551787 SLC4A1P02730 911 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 CEACAM5P06731 702 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 CDK4P11802 303 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 NFKB1P19838 968 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 KELP23276 732 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 DUSP3P51452 185 aaPredicted RBP16.67■□□□□ 0.26
BRF1-219ENST00000551787 COPS2P61201 443 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 E2F1Q01094 437 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 CDK18Q07002 472 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 NR0B2Q15466 257 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 C6orf132Q5T0Z8 1188 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 PID1Q7Z2X4 250 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 LYSMD3Q7Z3D4 306 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 TAF8Q7Z7C8 310 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 SFTPA2Q8IWL1 248 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 ZNF567Q8N184 647 aa16.67■□□□□ 0.26
BRF1-219ENST00000551787 KDF1Q8NAX2 398 aaPredicted RBP16.67■□□□□ 0.26
BRF1-219ENST00000551787 CCL4L1Q8NHW4 92 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms