RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 POLD3Q15054 466 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-219ENST00000551544 USP41Q3LFD5 358 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 RETREG3Q86VR2 466 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 DHFR2Q86XF0 187 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 CLYBLQ8N0X4 340 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 TTC9BQ8N6N2 239 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 OR13C4Q8NGS5 318 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 FAM110BQ8TC76 370 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 TOP1MTQ969P6 601 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 PBXIP1Q96AQ6 731 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 L3HYPDHQ96EM0 354 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 NSUN5Q96P11 429 aaKnown RBP13.03□□□□□ -0.32
CACNB3-219ENST00000551544 RPRD1AQ96P16 312 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-219ENST00000551544 KCNA7Q96RP8 456 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.03□□□□□ -0.32
CACNB3-219ENST00000551544 TMEM181Q9P2C4 612 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 SCML2Q9UQR0 700 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 PRG3Q9Y2Y8 225 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-219ENST00000551544 A0A0J9YYE9 177 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 ARHGEF37A1IGU5 675 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 CD3EAPO15446 510 aaKnown RBP13.03□□□□□ -0.32
CACNB3-219ENST00000551544 RAMP2O60895 175 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 SOAT2O75908 522 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 CDK14O94921 469 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 WISP3O95389 354 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-219ENST00000551544 PRSS56P0CW18 603 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 SLC7A1P30825 629 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 ACVRL1P37023 503 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 HPCAP84074 193 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 SEMA3AQ14563 771 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 DSC3Q14574 896 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 OR4D1Q15615 310 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 UGT3A2Q3SY77 523 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 VPS26BQ4G0F5 336 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 RBM12BQ8IXT5 1001 aaKnown RBP13.03□□□□□ -0.32
CACNB3-219ENST00000551544 KLHL23Q8NBE8 558 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 ZFP28Q8NHY6 868 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 UROC1Q96N76 676 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 TIMMDC1Q9NPL8 285 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 POLR3BQ9NW08 1133 aaPredicted RBP13.03□□□□□ -0.32
CACNB3-219ENST00000551544 FNIP2Q9P278 1114 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 CNOT6Q9ULM6 557 aaKnown RBP13.03□□□□□ -0.32
CACNB3-219ENST00000551544 PCDHB8Q9UN66 801 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 DMTF1Q9Y222 760 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 TCRBV3S1A0A5B6 114 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 CCDC162PA2VCL2 907 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 PIP5K1BO14986 540 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 AKAP10O43572 662 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 GFAPP14136 432 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 CKMT2P17540 419 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 GPX3P22352 226 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 FDXRP22570 491 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 MSANTD2Q6P1R3 559 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 BORAQ6PGQ7 559 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 ATAD1Q8NBU5 361 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 TRPC4APQ8TEL6 797 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 CANT1Q8WVQ1 401 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 TMEM79Q9BSE2 394 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 SLC2A11Q9BYW1 496 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 DNAAF2Q9NVR5 837 aaKnown RBP13.03□□□□□ -0.32
CACNB3-219ENST00000551544 CNOT11Q9UKZ1 510 aaKnown RBP13.03□□□□□ -0.32
CACNB3-219ENST00000551544 BTRCQ9Y297 605 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 RNF11Q9Y3C5 154 aa13.03□□□□□ -0.32
CACNB3-219ENST00000551544 NLRC5Q86WI3 1866 aa13.02□□□□□ -0.32
CACNB3-219ENST00000551544 TDRD15B5MCY1 1934 aaKnown RBP13.02□□□□□ -0.32
CACNB3-219ENST00000551544 PTPRDP23468 1912 aa13.02□□□□□ -0.32
CACNB3-219ENST00000551544 H3BMM5 538 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 MUSKO15146 869 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 HNRNPRO43390 633 aaKnown RBP13.02□□□□□ -0.33
CACNB3-219ENST00000551544 OR1E1P30953 314 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 OR1G1P47890 313 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 ARPP19P56211 112 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 GRB7Q14451 532 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 HMBOX1Q6NT76 420 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 RAB44Q7Z6P3 723 aaPredicted RBP13.02□□□□□ -0.33
CACNB3-219ENST00000551544 GALNT7Q86SF2 657 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 ATP6V0D2Q8N8Y2 350 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 PCYOX1LQ8NBM8 494 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 MIPOL1Q8TD10 442 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 TWIST2Q8WVJ9 160 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 SLC45A3Q96JT2 553 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 EFHD1Q9BUP0 239 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 UPF3AQ9H1J1 476 aaKnown RBP13.02□□□□□ -0.33
CACNB3-219ENST00000551544 SPC25Q9HBM1 224 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 AURKCQ9UQB9 309 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 LOC285095A0A1B0GVY8 99 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 UBA6A0AVT1 1052 aaPredicted RBP13.02□□□□□ -0.33
CACNB3-219ENST00000551544 LINC00032P0C843 101 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 HSPA8P11142 646 aaKnown RBP13.02□□□□□ -0.33
CACNB3-219ENST00000551544 ATP6V1B2P21281 511 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 SLC26A3P40879 764 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 HUNKP57058 714 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 TIAL1Q01085 375 aaKnown RBP eCLIP13.02□□□□□ -0.33
CACNB3-219ENST00000551544 CAPRIN1Q14444 709 aaKnown RBP13.02□□□□□ -0.33
CACNB3-219ENST00000551544 ZNF235Q14590 738 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 C10orf120Q5SQS8 335 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 MRNIPQ6NTE8 343 aa13.02□□□□□ -0.33
CACNB3-219ENST00000551544 CHERPQ8IWX8 916 aaKnown RBP13.02□□□□□ -0.33
CACNB3-219ENST00000551544 DCP1BQ8IZD4 617 aaKnown RBP13.02□□□□□ -0.33
CACNB3-219ENST00000551544 TEX26Q8N6G2 289 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms