RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 TTC27Q6P3X3 843 aa22.5■■□□□ 1.19
BRF1-216ENST00000550208 PDCD7Q8N8D1 485 aaKnown RBP22.5■■□□□ 1.19
BRF1-216ENST00000550208 ATL2Q8NHH9 583 aa22.5■■□□□ 1.19
BRF1-216ENST00000550208 CCHCR1Q8TD31 782 aa22.5■■□□□ 1.19
BRF1-216ENST00000550208 SCAMP4Q969E2 229 aa22.5■■□□□ 1.19
BRF1-216ENST00000550208 CAPZA3Q96KX2 299 aa22.5■■□□□ 1.19
BRF1-216ENST00000550208 TBL1YQ9BQ87 522 aa22.5■■□□□ 1.19
BRF1-216ENST00000550208 GPR63Q9BZJ6 419 aa22.5■■□□□ 1.19
BRF1-216ENST00000550208 KCTD5Q9NXV2 234 aa22.5■■□□□ 1.19
BRF1-216ENST00000550208 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.5■■□□□ 1.19
BRF1-216ENST00000550208 OR1A2Q9Y585 309 aa22.5■■□□□ 1.19
BRF1-216ENST00000550208 SPTY2D1-AS1A0A0U1RR47 76 aa22.49■■□□□ 1.19
BRF1-216ENST00000550208 A0A1B0GTQ1 180 aa22.49■■□□□ 1.19
BRF1-216ENST00000550208 SLC30A4O14863 429 aa22.49■■□□□ 1.19
BRF1-216ENST00000550208 FGF1P05230 155 aa22.49■■□□□ 1.19
BRF1-216ENST00000550208 COILP38432 576 aaPredicted RBP22.49■■□□□ 1.19
BRF1-216ENST00000550208 SPINT3P49223 89 aa22.49■■□□□ 1.19
BRF1-216ENST00000550208 IL9RQ01113 521 aa22.49■■□□□ 1.19
BRF1-216ENST00000550208 MTM1Q13496 603 aa22.49■■□□□ 1.19
BRF1-216ENST00000550208 FZD2Q14332 565 aa22.49■■□□□ 1.19
BRF1-216ENST00000550208 CYP1B1Q16678 543 aa22.49■■□□□ 1.19
BRF1-216ENST00000550208 ZNF542PQ5EBM4 170 aa22.49■■□□□ 1.19
BRF1-216ENST00000550208 DENND5AQ6IQ26 1287 aa22.49■■□□□ 1.19
BRF1-216ENST00000550208 ESRP1Q6NXG1 681 aaKnown RBP22.49■■□□□ 1.19
BRF1-216ENST00000550208 CREG2Q8IUH2 290 aa22.49■■□□□ 1.19
BRF1-216ENST00000550208 NRSN1Q8IZ57 195 aa22.49■■□□□ 1.19
BRF1-216ENST00000550208 SRPK1Q96SB4 655 aaKnown RBP22.49■■□□□ 1.19
BRF1-216ENST00000550208 TM7SF3Q9NS93 570 aa22.49■■□□□ 1.19
BRF1-216ENST00000550208 PAK5Q9P286 719 aa22.49■■□□□ 1.19
BRF1-216ENST00000550208 CDV3Q9UKY7 258 aaKnown RBP22.49■■□□□ 1.19
BRF1-216ENST00000550208 LAMA1P25391 3075 aa22.49■■□□□ 1.19
BRF1-216ENST00000550208 GOLGA6CA6NDK9 693 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 GOLGA6BA6NDN3 693 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 TOR1BO14657 336 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 TM4SF5O14894 197 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 PSMD3O43242 534 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 DFNA5O60443 496 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 SLC4A1P02730 911 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 GOLGA6DP0CG33 693 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 CD59P13987 128 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 TRIM23P36406 574 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 FDFT1P37268 417 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 THOP1P52888 689 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 ETF1P62495 437 aaKnown RBP22.48■■□□□ 1.19
BRF1-216ENST00000550208 DPTQ07507 201 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 BNIP3Q12983 259 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 NLRP8Q86W28 1048 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 BLOC1S5Q8TDH9 187 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 FUBP1Q96AE4 644 aaKnown RBP22.48■■□□□ 1.19
BRF1-216ENST00000550208 AP2M1Q96CW1 435 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 AGAP2Q99490 1192 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 RIOK2Q9BVS4 552 aaKnown RBP22.48■■□□□ 1.19
BRF1-216ENST00000550208 GOLGA6AQ9NYA3 693 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 PKD2L2Q9NZM6 624 aa22.48■■□□□ 1.19
BRF1-216ENST00000550208 TP53BP1Q12888 1972 aaPredicted RBP22.47■■□□□ 1.19
BRF1-216ENST00000550208 ZNF883P0CG24 379 aa22.47■■□□□ 1.19
BRF1-216ENST00000550208 CASQ1P31415 396 aa22.47■■□□□ 1.19
BRF1-216ENST00000550208 RXRGP48443 463 aa22.47■■□□□ 1.19
BRF1-216ENST00000550208 EIF2B5Q13144 721 aaKnown RBP22.47■■□□□ 1.19
BRF1-216ENST00000550208 MSLNQ13421 630 aaPredicted RBP22.47■■□□□ 1.19
BRF1-216ENST00000550208 PTK2BQ14289 1009 aa22.47■■□□□ 1.19
BRF1-216ENST00000550208 SYT10Q6XYQ8 523 aa22.47■■□□□ 1.19
BRF1-216ENST00000550208 NYAP1Q6ZVC0 841 aa22.47■■□□□ 1.19
BRF1-216ENST00000550208 ZNF765Q7L2R6 523 aa22.47■■□□□ 1.19
BRF1-216ENST00000550208 RAVER1Q8IY67 606 aaKnown RBP22.47■■□□□ 1.19
BRF1-216ENST00000550208 TTC30BQ8N4P2 665 aa22.47■■□□□ 1.19
BRF1-216ENST00000550208 LGR4Q9BXB1 951 aa22.47■■□□□ 1.19
BRF1-216ENST00000550208 FAM83DQ9H4H8 585 aa22.47■■□□□ 1.19
BRF1-216ENST00000550208 LRRC40Q9H9A6 602 aa22.47■■□□□ 1.19
BRF1-216ENST00000550208 RAB6BQ9NRW1 208 aa22.47■■□□□ 1.19
BRF1-216ENST00000550208 ASCC3Q8N3C0 2202 aaKnown RBP22.47■■□□□ 1.19
BRF1-216ENST00000550208 CABIN1Q9Y6J0 2220 aa22.46■■□□□ 1.19
BRF1-216ENST00000550208 RGSL1A5PLK6 1076 aa22.46■■□□□ 1.19
BRF1-216ENST00000550208 AP2A1O95782 977 aa22.46■■□□□ 1.19
BRF1-216ENST00000550208 TSHRP16473 764 aa22.46■■□□□ 1.19
BRF1-216ENST00000550208 GPR1P46091 355 aa22.46■■□□□ 1.19
BRF1-216ENST00000550208 CCT8P50990 548 aa22.46■■□□□ 1.19
BRF1-216ENST00000550208 NFATC4Q14934 902 aa22.46■■□□□ 1.19
BRF1-216ENST00000550208 TRIP13Q15645 432 aaPredicted RBP22.46■■□□□ 1.19
BRF1-216ENST00000550208 HS1BP3Q53T59 392 aa22.46■■□□□ 1.19
BRF1-216ENST00000550208 RAET1GQ6H3X3 334 aa22.46■■□□□ 1.19
BRF1-216ENST00000550208 OXR1Q8N573 874 aa22.46■■□□□ 1.19
BRF1-216ENST00000550208 TRABDQ9H4I3 376 aa22.46■■□□□ 1.19
BRF1-216ENST00000550208 ARNT2Q9HBZ2 717 aa22.46■■□□□ 1.19
BRF1-216ENST00000550208 BPIFA1Q9NP55 256 aa22.46■■□□□ 1.19
BRF1-216ENST00000550208 HACD3Q9P035 362 aa22.46■■□□□ 1.19
BRF1-216ENST00000550208 KLF15Q9UIH9 416 aa22.46■■□□□ 1.19
BRF1-216ENST00000550208 PNMA8BQ9ULN7 279 aaPredicted RBP22.46■■□□□ 1.19
BRF1-216ENST00000550208 BUD23O43709 281 aaKnown RBP22.45■■□□□ 1.18
BRF1-216ENST00000550208 PHF2O75151 1096 aa22.45■■□□□ 1.18
BRF1-216ENST00000550208 SOD1P00441 154 aa22.45■■□□□ 1.18
BRF1-216ENST00000550208 HOXC4P09017 264 aaPredicted RBP22.45■■□□□ 1.18
BRF1-216ENST00000550208 TPH1P17752 444 aa22.45■■□□□ 1.18
BRF1-216ENST00000550208 SDHBP21912 280 aa22.45■■□□□ 1.18
BRF1-216ENST00000550208 ARRB1P49407 418 aaPredicted RBP22.45■■□□□ 1.18
BRF1-216ENST00000550208 SLC14A1Q13336 389 aa22.45■■□□□ 1.18
BRF1-216ENST00000550208 CCDC137Q6PK04 289 aaKnown RBP22.45■■□□□ 1.18
BRF1-216ENST00000550208 ENPP7Q6UWV6 458 aa22.45■■□□□ 1.18
BRF1-216ENST00000550208 DBX2Q6ZNG2 339 aa22.45■■□□□ 1.18
BRF1-216ENST00000550208 GATAD2AQ86YP4 633 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms