RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 POLR1EQ9GZS1 481 aaKnown RBP13.42□□□□□ -0.26
GCN1-206ENST00000549815 PHPT1Q9NRX4 125 aaPredicted RBP13.42□□□□□ -0.26
GCN1-206ENST00000549815 CTTNBP2NLQ9P2B4 639 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 SLC17A4Q9Y2C5 497 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.42□□□□□ -0.26
GCN1-206ENST00000549815 ST14Q9Y5Y6 855 aa13.42□□□□□ -0.26
GCN1-206ENST00000549815 A0A0J9YYE9 177 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 TEX51A0A1B0GUA7 166 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 ATXN7O15265 892 aaPredicted RBP13.41□□□□□ -0.26
GCN1-206ENST00000549815 TRBC1P01850 177 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 CCNCP24863 283 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 NFKBIAP25963 317 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 RBMS1P29558 406 aaKnown RBP13.41□□□□□ -0.26
GCN1-206ENST00000549815 CCKBRP32239 447 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 GJC1P36383 396 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 MLLT3P42568 568 aaPredicted RBP13.41□□□□□ -0.26
GCN1-206ENST00000549815 SSR1P43307 286 aaKnown RBP13.41□□□□□ -0.26
GCN1-206ENST00000549815 CXADRP78310 365 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 DSC2Q02487 901 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 GBE1Q04446 702 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 NIPAL4Q0D2K0 466 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 SLC10A2Q12908 348 aaPredicted RBP13.41□□□□□ -0.26
GCN1-206ENST00000549815 IFI16Q16666 785 aaKnown RBP13.41□□□□□ -0.26
GCN1-206ENST00000549815 TSR1Q2NL82 804 aaKnown RBP13.41□□□□□ -0.26
GCN1-206ENST00000549815 C14orf28Q4W4Y0 310 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 SPECC1LQ69YQ0 1117 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 TIGD7Q6NT04 549 aaPredicted RBP13.41□□□□□ -0.26
GCN1-206ENST00000549815 PCSK4Q6UW60 755 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 USP45Q70EL2 814 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 NLRP8Q86W28 1048 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 KCTD6Q8NC69 237 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 LRRN4Q8WUT4 740 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 SCARF2Q96GP6 870 aaPredicted RBP13.41□□□□□ -0.26
GCN1-206ENST00000549815 GFM1Q96RP9 751 aaKnown RBP13.41□□□□□ -0.26
GCN1-206ENST00000549815 TDRD1Q9BXT4 1180 aaKnown RBP13.41□□□□□ -0.26
GCN1-206ENST00000549815 ABCG8Q9H221 673 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 SYNDIG1Q9H7V2 258 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 CARS2Q9HA77 564 aaKnown RBP13.41□□□□□ -0.26
GCN1-206ENST00000549815 SPATS2LQ9NUQ6 558 aaKnown RBP13.41□□□□□ -0.26
GCN1-206ENST00000549815 RBM22Q9NW64 420 aaKnown RBP eCLIP13.41□□□□□ -0.26
GCN1-206ENST00000549815 TRNAU1APQ9NX07 287 aaKnown RBP13.41□□□□□ -0.26
GCN1-206ENST00000549815 AMACRQ9UHK6 382 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 RNF215Q9Y6U7 377 aa13.41□□□□□ -0.26
GCN1-206ENST00000549815 SSU72P8A0A1W2PR75 194 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 KLK10O43240 276 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 NUDT21O43809 227 aaKnown RBP13.4□□□□□ -0.26
GCN1-206ENST00000549815 TNFSF15O95150 251 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 PRLP01236 227 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 FGF1P05230 155 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 HLA-DQB2P05538 268 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 ITGA2BP08514 1039 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 CCNB1P14635 433 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 MAN1A1P33908 653 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 INHBCP55103 352 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 B4GALNT1Q00973 533 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 ZFP36L1Q07352 338 aaKnown RBP13.4□□□□□ -0.26
GCN1-206ENST00000549815 EIF3IQ13347 325 aaKnown RBP13.4□□□□□ -0.26
GCN1-206ENST00000549815 ARHGEF7Q14155 803 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 LRRC66Q68CR7 880 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 RAET1GQ6H3X3 334 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 TMPRSS9Q7Z410 1059 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 SPRED1Q7Z699 444 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 CCNJLQ8IV13 435 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 LSM14AQ8ND56 463 aaKnown RBP13.4□□□□□ -0.26
GCN1-206ENST00000549815 SNRNP27Q8WVK2 155 aaKnown RBP13.4□□□□□ -0.26
GCN1-206ENST00000549815 CTNNBL1Q8WYA6 563 aaPredicted RBP13.4□□□□□ -0.26
GCN1-206ENST00000549815 RAPGEF5Q92565 580 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 HDAC11Q96DB2 347 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 FOXP3Q9BZS1 431 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 DPEP2Q9H4A9 486 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 EPB41L5Q9HCM4 733 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 LRIT1Q9P2V4 623 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 CD84Q9UIB8 345 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 LCMT1Q9UIC8 334 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 MOSPD1Q9UJG1 213 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 ATXN7L1Q9ULK2 861 aaPredicted RBP13.4□□□□□ -0.26
GCN1-206ENST00000549815 SUFUQ9UMX1 484 aa13.4□□□□□ -0.26
GCN1-206ENST00000549815 CAPN8A6NHC0 703 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 B4DGG1 531 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 TMX2-CTNND1H3BSU7 103 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 TK2O00142 265 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 PLD2O14939 933 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 C1QL1O75973 258 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 IVLP07476 585 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 MMP2P08253 660 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 KRT7P08729 469 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 TMEM253P0C7T8 217 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 ZNF30P17039 623 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 CES1P23141 567 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 KDELR1P24390 212 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 AK4P27144 223 aaPredicted RBP13.39□□□□□ -0.27
GCN1-206ENST00000549815 UGT1A5P35504 534 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 POLD2P49005 469 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 STC1P52823 247 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 UCNP55089 124 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 MAZP56270 477 aaKnown RBP13.39□□□□□ -0.27
GCN1-206ENST00000549815 TMPRSS3P57727 454 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 ITKQ08881 620 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 NR1D2Q14995 579 aa13.39□□□□□ -0.27
GCN1-206ENST00000549815 ADAMTSL4Q6UY14 1074 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms