RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 UGT2B4P06133 528 aa16.28■□□□□ 0.2
CUX1-213ENST00000549414 CLK1P49759 484 aaKnown RBP16.28■□□□□ 0.2
CUX1-213ENST00000549414 TRIP4Q15650 581 aaPredicted RBP16.28■□□□□ 0.2
CUX1-213ENST00000549414 ATXN7L2Q5T6C5 722 aaPredicted RBP16.28■□□□□ 0.2
CUX1-213ENST00000549414 FBXL19Q6PCT2 694 aa16.28■□□□□ 0.2
CUX1-213ENST00000549414 MAGED4Q96JG8 741 aa16.28■□□□□ 0.2
CUX1-213ENST00000549414 IMPAD1Q9NX62 359 aa16.28■□□□□ 0.2
CUX1-213ENST00000549414 SCN3BQ9NY72 215 aa16.28■□□□□ 0.2
CUX1-213ENST00000549414 CIDEBQ9UHD4 219 aa16.28■□□□□ 0.2
CUX1-213ENST00000549414 FKBPLQ9UIM3 349 aa16.28■□□□□ 0.2
CUX1-213ENST00000549414 LNPEPQ9UIQ6 1025 aa16.28■□□□□ 0.2
CUX1-213ENST00000549414 INVSQ9Y283 1065 aa16.28■□□□□ 0.2
CUX1-213ENST00000549414 N4BP2Q86UW6 1770 aaPredicted RBP16.28■□□□□ 0.2
CUX1-213ENST00000549414 PRMT5O14744 637 aaPredicted RBP16.27■□□□□ 0.2
CUX1-213ENST00000549414 NRP2O60462 931 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 LRATO95237 230 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 GJA5P36382 358 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 ACVRL1P37023 503 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 SLC9B1Q4ZJI4 515 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 SETMARQ53H47 684 aaPredicted RBP16.27■□□□□ 0.2
CUX1-213ENST00000549414 ACSBG2Q5FVE4 666 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 RNF168Q8IYW5 571 aaPredicted RBP16.27■□□□□ 0.2
CUX1-213ENST00000549414 AUTS2Q8WXX7 1259 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 TPD52L3Q96J77 140 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 BDH2Q9BUT1 245 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 GNPTGQ9UJJ9 305 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 MYADML2A6NDP7 307 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 MLYCDO95822 493 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 ACADMP11310 421 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 COL6A2P12110 1019 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 PROZP22891 400 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 ATP6V0D1P61421 351 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 FNDC3BQ53EP0 1204 aaKnown RBP16.27■□□□□ 0.2
CUX1-213ENST00000549414 GCNT7Q6ZNI0 430 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 ADAMTSL2Q86TH1 951 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 HS3ST4Q9Y661 456 aa16.27■□□□□ 0.2
CUX1-213ENST00000549414 A0A0J9YYE9 177 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 IQCF5A8MTL0 148 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 IL5RAQ01344 420 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 GHRHRQ02643 423 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 ABRQ12979 859 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 TSNQ15631 228 aaKnown RBP16.27■□□□□ 0.19
CUX1-213ENST00000549414 AGMOQ6ZNB7 445 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 ADCK1Q86TW2 530 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 SYT12Q8IV01 421 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 SMG8Q8ND04 991 aaKnown RBP16.27■□□□□ 0.19
CUX1-213ENST00000549414 MYO19Q96H55 970 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 FCRL5Q96RD9 977 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 MIEF1Q9NQG6 463 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 MIOSQ9NXC5 875 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 ADAMTS7Q9UKP4 1686 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 TMEM233B4DJY2 109 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 SYN3O14994 580 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 VPS4BO75351 444 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 MT-ND1P03886 318 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 FCGR1AP12314 374 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 PRKG2Q13237 762 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 ZNF280BQ86YH2 543 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 C19orf60Q96EN9 201 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 SUSD3Q96L08 255 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 HAPLN3Q96S86 360 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 COPS8Q99627 209 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 ZFYVE1Q9HBF4 777 aa16.27■□□□□ 0.19
CUX1-213ENST00000549414 SCHIP1Q9P0W5 487 aaPredicted RBP16.27■□□□□ 0.19
CUX1-213ENST00000549414 PTGES3LE9PB15 166 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 NEDD8-MDP1E9PL57 170 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 TYROBPO43914 113 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 HS6ST1O60243 411 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 CNTN5O94779 1100 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 ADH1AP07327 375 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 FBXW4P57775 412 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 PDK3Q15120 406 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 MAPKAPK3Q16644 382 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 VPS26BQ4G0F5 336 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 NPAS4Q8IUM7 802 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 PLD3Q8IV08 490 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 RTKNQ9BST9 563 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 ANAPC2Q9UJX6 822 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 DNAJC25-GNG10A0A024R161 153 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 AHSGP02765 367 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 AP5B1Q2VPB7 878 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 PITRM1Q5JRX3 1037 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 LRRC73Q5JTD7 316 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 LDLRAD1Q5T700 205 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 RPS27LQ71UM5 84 aaKnown RBP16.26■□□□□ 0.19
CUX1-213ENST00000549414 TBC1D19Q8N5T2 526 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 OR9Q1Q8NGQ5 310 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 OSCP1Q8WVF1 389 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 DLG3Q92796 817 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 MOCOSQ96EN8 888 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 HTATIP2Q9BUP3 242 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 ARHGAP39Q9C0H5 1083 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 THG1LQ9NWX6 298 aaKnown RBP16.26■□□□□ 0.19
CUX1-213ENST00000549414 GPR32O75388 356 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 TNFAIP8O95379 198 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 HNRNPCP07910 306 aaKnown RBP eCLIP16.26■□□□□ 0.197e-7■■□□□ 13.7
CUX1-213ENST00000549414 VCLP18206 1134 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 GATMP50440 423 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 TLE2Q04725 743 aa16.26■□□□□ 0.19
CUX1-213ENST00000549414 CPNE9Q8IYJ1 553 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms