RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-208ENST00000549205 KCNMB4Q86W47 210 aa12.22□□□□□ -0.45
ERBB3-208ENST00000549205 CBARPQ8N350 705 aaPredicted RBP12.22□□□□□ -0.45
ERBB3-208ENST00000549205 TSTD1Q8NFU3 115 aa12.22□□□□□ -0.45
ERBB3-208ENST00000549205 GANCQ8TET4 914 aa12.22□□□□□ -0.45
ERBB3-208ENST00000549205 HMGB4Q8WW32 186 aa12.22□□□□□ -0.45
ERBB3-208ENST00000549205 HDAC10Q969S8 669 aa12.22□□□□□ -0.45
ERBB3-208ENST00000549205 CCDC77Q9BR77 488 aa12.22□□□□□ -0.45
ERBB3-208ENST00000549205 IER2Q9BTL4 223 aa12.22□□□□□ -0.45
ERBB3-208ENST00000549205 MFSD1Q9H3U5 465 aa12.22□□□□□ -0.45
ERBB3-208ENST00000549205 VIPAS39Q9H9C1 493 aa12.22□□□□□ -0.45
ERBB3-208ENST00000549205 C20orf96Q9NUD7 363 aaPredicted RBP12.22□□□□□ -0.45
ERBB3-208ENST00000549205 C2orf42Q9NWW7 574 aa12.22□□□□□ -0.45
ERBB3-208ENST00000549205 GGT7Q9UJ14 662 aa12.22□□□□□ -0.45
ERBB3-208ENST00000549205 FZD4Q9ULV1 537 aa12.22□□□□□ -0.45
ERBB3-208ENST00000549205 NFS1Q9Y697 457 aa12.22□□□□□ -0.45
ERBB3-208ENST00000549205 ANKRD12Q6UB98 2062 aa12.22□□□□□ -0.45
ERBB3-208ENST00000549205 EXOC1LA0A1B0GW35 172 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 CCDC162PA2VCL2 907 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 H7C0S8 307 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 PSMD11O00231 422 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 CCL22O00626 93 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 NEMP1O14524 444 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 TSPAN6O43657 245 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 TCEA3O75764 348 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 ELFN1P0C7U0 828 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 ERVK-10P10266 1014 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 ACADMP11310 421 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 BPIP17213 487 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 MAGEA9P43362 315 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 LIG3P49916 1009 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 EIF3BP55884 814 aaKnown RBP12.21□□□□□ -0.45
ERBB3-208ENST00000549205 TAS2R38P59533 333 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 PRAMEP78395 509 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 TMPRSS15P98073 1019 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 IFFO1Q0D2I5 559 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 NAB1Q13506 487 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 KBTBD12Q3ZCT8 623 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 HSP90AA5PQ58FG0 334 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 HSD11B1LQ7Z5J1 315 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 KBTBD6Q86V97 674 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 RASSF3Q86WH2 238 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 OR6P1Q8NGX9 317 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 OR2W6PQ8NHA6 318 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 CDKN2AIPNLQ96HQ2 116 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 SGSM3Q96HU1 749 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 TBATAQ96M53 351 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 ZIM3Q96PE6 472 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 WRAP53Q9BUR4 548 aaKnown RBP12.21□□□□□ -0.45
ERBB3-208ENST00000549205 SUDS3Q9H7L9 328 aaPredicted RBP12.21□□□□□ -0.45
ERBB3-208ENST00000549205 BPIFA1Q9NP55 256 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 PPANQ9NQ55 473 aaKnown RBP12.21□□□□□ -0.45
ERBB3-208ENST00000549205 SMYD2Q9NRG4 433 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 PKD2L2Q9NZM6 624 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 IL1RAPL1Q9NZN1 696 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 FETUBQ9UGM5 382 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 FKBPLQ9UIM3 349 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 NCKAP1Q9Y2A7 1128 aa12.21□□□□□ -0.45
ERBB3-208ENST00000549205 PI4KAP42356 2102 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 THADAQ6YHU6 1953 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 RGSL1A5PLK6 1076 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 CXorf49A8MYA2 514 aaPredicted RBP12.2□□□□□ -0.46
ERBB3-208ENST00000549205 ATP8B1O43520 1251 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 PLRG1O43660 514 aaKnown RBP12.2□□□□□ -0.46
ERBB3-208ENST00000549205 SASH3O75995 380 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 GOT2P00505 430 aaKnown RBP12.2□□□□□ -0.46
ERBB3-208ENST00000549205 PDGFBP01127 241 aaPredicted RBP12.2□□□□□ -0.46
ERBB3-208ENST00000549205 IVLP07476 585 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 DCNP07585 359 aaKnown RBP12.2□□□□□ -0.46
ERBB3-208ENST00000549205 SPAM1P38567 509 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 SPINT3P49223 89 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 TPMTP51580 245 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 PTPN5P54829 565 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 XIAPP98170 497 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 ZNF844Q08AG5 666 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 MTAPQ13126 283 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 THOC5Q13769 683 aaKnown RBP12.2□□□□□ -0.46
ERBB3-208ENST00000549205 EFTUD2Q15029 972 aaKnown RBP eCLIP12.2□□□□□ -0.469e-8■■■■□ 22.5
ERBB3-208ENST00000549205 SMAD1Q15797 465 aaKnown RBP12.2□□□□□ -0.46
ERBB3-208ENST00000549205 TEDDM1Q5T9Z0 273 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 ZDHHC20Q5W0Z9 365 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 CWF19L1Q69YN2 538 aaKnown RBP12.2□□□□□ -0.46
ERBB3-208ENST00000549205 NEPROQ6NW34 567 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 AFTPHQ6ULP2 937 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 MARK2Q7KZI7 788 aaKnown RBP12.2□□□□□ -0.46
ERBB3-208ENST00000549205 TECPR1Q7Z6L1 1165 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 CNTN4Q8IWV2 1026 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 CTAGE3PQ8IX95 158 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 LMNTD2Q8IXW0 634 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 RAVER1Q8IY67 606 aaKnown RBP12.2□□□□□ -0.46
ERBB3-208ENST00000549205 PPM1NQ8N819 430 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 OR4L1Q8NH43 312 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 CDKL2Q92772 493 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 COQ10AQ96MF6 247 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 PLEKHG4BQ96PX9 1271 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 HHIPQ96QV1 700 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 FAM167BQ9BTA0 163 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 TMEM109Q9BVC6 243 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 ROPN1BQ9BZX4 212 aaPredicted RBP12.2□□□□□ -0.46
ERBB3-208ENST00000549205 CDH19Q9H159 772 aa12.2□□□□□ -0.46
ERBB3-208ENST00000549205 PPCSQ9HAB8 311 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms