RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 A8MX80 341 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 STMND1H3BQB6 276 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 ATMINO43313 823 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-218ENST00000548945 PEX11BO96011 259 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 CPP00450 1065 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 IVLP07476 585 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 CSRP3P50461 194 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 MAPK10P53779 464 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 OR1D5P58170 312 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 CDK3Q00526 305 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 DPTQ07507 201 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 NFATC3Q12968 1075 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 C16orf72Q14CZ0 275 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 NCAPHQ15003 741 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 DPYSL2Q16555 572 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 BOLA3Q53S33 107 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 PRICKLE2Q7Z3G6 844 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 ZFAND4Q86XD8 727 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 BBS5Q8N3I7 341 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 EXTL1Q92935 676 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 TRIM11Q96F44 468 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 SCRN2Q96FV2 425 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 SCARF2Q96GP6 870 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-218ENST00000548945 MCCC1Q96RQ3 725 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-218ENST00000548945 MGME1Q9BQP7 344 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 HSD3B7Q9H2F3 369 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 RDH14Q9HBH5 336 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 SLC17A4Q9Y2C5 497 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 PPIL1Q9Y3C6 166 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 PCDHGC4Q9Y5F7 938 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 PCDHGA3Q9Y5H0 932 aa12.84□□□□□ -0.35
PTCH1-218ENST00000548945 IGHV5-10-1A0A0J9YXX1 117 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 TMCO5BA8MYB1 307 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 H3BRJ5 948 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 ECEL1O95672 775 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 FTLP02792 175 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-218ENST00000548945 FUCA1P04066 466 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 MYBL1P10243 752 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 KRT10P13645 584 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 ITGB6P18564 788 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 CD1CP29017 333 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 ALDH4A1P30038 563 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 ARL4AP40617 200 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 ETV3P41162 512 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 LIMK2P53671 638 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 MAZP56270 477 aaKnown RBP12.83□□□□□ -0.36
PTCH1-218ENST00000548945 SRSF6Q13247 344 aaKnown RBP12.83□□□□□ -0.36
PTCH1-218ENST00000548945 AMZ1Q400G9 498 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 TMCO3Q6UWJ1 677 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 ZNF574Q6ZN55 896 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-218ENST00000548945 USP45Q70EL2 814 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 POLNQ7Z5Q5 900 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 VASH2Q86V25 355 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 CCDC112Q8NEF3 446 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 OR4D9Q8NGE8 314 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 TAAR9Q96RI9 348 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 NUDT22Q9BRQ3 303 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 ANP32EQ9BTT0 268 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 TRIM7Q9C029 511 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 CDH19Q9H159 772 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 NOD2Q9HC29 1040 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 MRPL47Q9HD33 250 aaKnown RBP12.83□□□□□ -0.36
PTCH1-218ENST00000548945 AIPL1Q9NZN9 384 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 SUFUQ9UMX1 484 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 DOPEY2Q9Y3R5 2298 aa12.83□□□□□ -0.36
PTCH1-218ENST00000548945 LRRC53A6NM62 1247 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 TERTO14746 1132 aaKnown RBP12.82□□□□□ -0.36
PTCH1-218ENST00000548945 MAFKO60675 156 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 PGLSO95336 258 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 LHCGRP22888 699 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 SERPINB6P35237 376 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 ADCY8P40145 1251 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 PRKCIP41743 596 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 GNPDA1P46926 289 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 ATP1A2P50993 1020 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 CDH6P55285 790 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 GPLD1P80108 840 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 CTBSQ01459 385 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 TRAF2Q12933 501 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 BIRC2Q13490 618 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 TBR1Q16650 682 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 RAET1GQ6H3X3 334 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 SLC30A9Q6PML9 568 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 ADAMTSL4Q6UY14 1074 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 ATG14Q6ZNE5 492 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 Q6ZVL8 140 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 HSD11B1LQ7Z5J1 315 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 TECPR1Q7Z6L1 1165 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 NLRP8Q86W28 1048 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 LRRC49Q8IUZ0 686 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 TP53INP2Q8IXH6 220 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 NAGSQ8N159 534 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 PGBD5Q8N414 524 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 PDCD6IPQ8WUM4 868 aaKnown RBP12.82□□□□□ -0.36
PTCH1-218ENST00000548945 NSMCE1Q8WV22 266 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 DDA1Q9BW61 102 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 HAUS4Q9H6D7 363 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 CNOT8Q9UFF9 292 aaKnown RBP12.82□□□□□ -0.36
PTCH1-218ENST00000548945 IL17BQ9UHF5 180 aa12.82□□□□□ -0.36
PTCH1-218ENST00000548945 IGHV1OR21-1A0A087WYE8 117 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms