RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 EXOC1LA0A1B0GW35 172 aa28.73■■■□□ 2.19
BRF1-213ENST00000548421 H7C0S8 307 aa28.73■■■□□ 2.19
BRF1-213ENST00000548421 PSMD11O00231 422 aa28.73■■■□□ 2.19
BRF1-213ENST00000548421 C1QAP02745 245 aa28.73■■■□□ 2.19
BRF1-213ENST00000548421 DCNP07585 359 aaKnown RBP28.73■■■□□ 2.19
BRF1-213ENST00000548421 ERVK-10P10266 1014 aa28.73■■■□□ 2.19
BRF1-213ENST00000548421 MAGEA9P43362 315 aa28.73■■■□□ 2.19
BRF1-213ENST00000548421 EIF3BP55884 814 aaKnown RBP28.73■■■□□ 2.19
BRF1-213ENST00000548421 TAS2R38P59533 333 aa28.73■■■□□ 2.19
BRF1-213ENST00000548421 IFFO1Q0D2I5 559 aa28.73■■■□□ 2.19
BRF1-213ENST00000548421 KBTBD12Q3ZCT8 623 aa28.73■■■□□ 2.19
BRF1-213ENST00000548421 CWF19L1Q69YN2 538 aaKnown RBP28.73■■■□□ 2.19
BRF1-213ENST00000548421 LIPIQ6XZB0 460 aa28.73■■■□□ 2.19
BRF1-213ENST00000548421 RASSF3Q86WH2 238 aa28.73■■■□□ 2.19
BRF1-213ENST00000548421 OR6P1Q8NGX9 317 aa28.73■■■□□ 2.19
BRF1-213ENST00000548421 OR2W6PQ8NHA6 318 aa28.73■■■□□ 2.19
BRF1-213ENST00000548421 WRAP53Q9BUR4 548 aaKnown RBP28.73■■■□□ 2.19
BRF1-213ENST00000548421 PKD2L2Q9NZM6 624 aa28.73■■■□□ 2.19
BRF1-213ENST00000548421 BCCIPQ9P287 314 aaKnown RBP eCLIP28.73■■■□□ 2.19
BRF1-213ENST00000548421 MUC3AQ02505 3323 aa28.73■■■□□ 2.19
BRF1-213ENST00000548421 FAM159BA6NKW6 160 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 TSPAN6O43657 245 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 LIG3P49916 1009 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 SMAD1Q15797 465 aaKnown RBP28.72■■■□□ 2.19
BRF1-213ENST00000548421 HSP90AA5PQ58FG0 334 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 LRIG3Q6UXM1 1119 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 PGBD3Q8N328 593 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 CBARPQ8N350 705 aaPredicted RBP28.72■■■□□ 2.19
BRF1-213ENST00000548421 HHIPQ96QV1 700 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 FKBPLQ9UIM3 349 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 NFS1Q9Y697 457 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 A0A0C4DFX4 3053 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 TECTAO75443 2155 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 CCDC162PA2VCL2 907 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 MAP2K7O14733 419 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 BPIP17213 487 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 SPINT3P49223 89 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 MTAPQ13126 283 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 THOC5Q13769 683 aaKnown RBP28.72■■■□□ 2.19
BRF1-213ENST00000548421 EFTUD2Q15029 972 aaKnown RBP eCLIP28.72■■■□□ 2.19
BRF1-213ENST00000548421 ZDHHC20Q5W0Z9 365 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 ANO7Q6IWH7 933 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 AFTPHQ6ULP2 937 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 RAVER1Q8IY67 606 aaKnown RBP28.72■■■□□ 2.19
BRF1-213ENST00000548421 CXorf40AQ8TE69 158 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 SUDS3Q9H7L9 328 aaPredicted RBP28.72■■■□□ 2.19
BRF1-213ENST00000548421 SMYD2Q9NRG4 433 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 ZFATQ9P243 1243 aa28.72■■■□□ 2.19
BRF1-213ENST00000548421 PLXNA2O75051 1894 aa28.71■■■□□ 2.19
BRF1-213ENST00000548421 GOLGA8KD6RF30 607 aa28.71■■■□□ 2.19
BRF1-213ENST00000548421 GOLGA8TH3BQL2 631 aa28.71■■■□□ 2.19
BRF1-213ENST00000548421 PLRG1O43660 514 aaKnown RBP28.71■■■□□ 2.19
BRF1-213ENST00000548421 GOT2P00505 430 aaKnown RBP28.71■■■□□ 2.19
BRF1-213ENST00000548421 PDGFBP01127 241 aaPredicted RBP28.71■■■□□ 2.19
BRF1-213ENST00000548421 IVLP07476 585 aa28.71■■■□□ 2.19
BRF1-213ENST00000548421 SPAM1P38567 509 aa28.71■■■□□ 2.19
BRF1-213ENST00000548421 PTPN5P54829 565 aa28.71■■■□□ 2.19
BRF1-213ENST00000548421 HSD11B1LQ7Z5J1 315 aa28.71■■■□□ 2.19
BRF1-213ENST00000548421 CTAGE3PQ8IX95 158 aa28.71■■■□□ 2.19
BRF1-213ENST00000548421 GABPB2Q8TAK5 448 aaPredicted RBP28.71■■■□□ 2.19
BRF1-213ENST00000548421 FAM167BQ9BTA0 163 aa28.71■■■□□ 2.19
BRF1-213ENST00000548421 RAD18Q9NS91 495 aa28.71■■■□□ 2.19
BRF1-213ENST00000548421 VPS18Q9P253 973 aa28.71■■■□□ 2.19
BRF1-213ENST00000548421 FETUBQ9UGM5 382 aa28.71■■■□□ 2.19
BRF1-213ENST00000548421 RGSL1A5PLK6 1076 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 PIAS1O75925 651 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 SASH3O75995 380 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 MC4RP32245 332 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 TPMTP51580 245 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 ADPRHP54922 357 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 NAB1Q13506 487 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 ACOX1Q15067 660 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 NEPROQ6NW34 567 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 LRRC6Q86X45 466 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 OR4L1Q8NH43 312 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 OR14C36Q8NHC7 312 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 CALML6Q8TD86 181 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 SGSM3Q96HU1 749 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 PLEKHG4BQ96PX9 1271 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 RUFY1Q96T51 708 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 IARS2Q9NSE4 1012 aaKnown RBP28.7■■■□□ 2.18
BRF1-213ENST00000548421 USP36Q9P275 1121 aaKnown RBP28.7■■■□□ 2.18
BRF1-213ENST00000548421 APPL1Q9UKG1 709 aa28.7■■■□□ 2.18
BRF1-213ENST00000548421 FNDC3AQ9Y2H6 1198 aaKnown RBP28.7■■■□□ 2.18
BRF1-213ENST00000548421 OR51F1A6NGY5 319 aa28.69■■■□□ 2.18
BRF1-213ENST00000548421 CXorf49A8MYA2 514 aaPredicted RBP28.69■■■□□ 2.18
BRF1-213ENST00000548421 ATP8B1O43520 1251 aa28.69■■■□□ 2.18
BRF1-213ENST00000548421 TCEA3O75764 348 aa28.69■■■□□ 2.18
BRF1-213ENST00000548421 C6P13671 934 aa28.69■■■□□ 2.18
BRF1-213ENST00000548421 PEX6Q13608 980 aa28.69■■■□□ 2.18
BRF1-213ENST00000548421 TEDDM1Q5T9Z0 273 aa28.69■■■□□ 2.18
BRF1-213ENST00000548421 PTAR1Q7Z6K3 402 aaPredicted RBP28.69■■■□□ 2.18
BRF1-213ENST00000548421 CNTN4Q8IWV2 1026 aa28.69■■■□□ 2.18
BRF1-213ENST00000548421 PPM1NQ8N819 430 aa28.69■■■□□ 2.18
BRF1-213ENST00000548421 PPCSQ9HAB8 311 aa28.69■■■□□ 2.18
BRF1-213ENST00000548421 ITM2CQ9NQX7 267 aa28.69■■■□□ 2.18
BRF1-213ENST00000548421 TRPM6Q9BX84 2022 aa28.68■■■□□ 2.18
BRF1-213ENST00000548421 POC1B-GALNT4F8VUJ3 575 aa28.68■■■□□ 2.18
BRF1-213ENST00000548421 MMP20O60882 483 aa28.68■■■□□ 2.18
BRF1-213ENST00000548421 PCDH8O95206 1070 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms