RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 HOXC4P09017 264 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 PRKAR1AP10644 381 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 MYCLP1P12525 358 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 LIFP15018 202 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 CTPS1P17812 591 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 CDK11BP21127 795 aaKnown RBP11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 TNFAIP3P21580 790 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 CD82P27701 267 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 CSTF2P33240 577 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 UGT1A3P35503 534 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 LIMK2P53671 638 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 AIF1P55008 147 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 MAXP61244 160 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 UBXN1Q04323 297 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 IL10RBQ08334 325 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 NSUN2Q08J23 767 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 IGFBP7Q16270 282 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 CNGA3Q16281 694 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 PPP1R15BQ5SWA1 713 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 RFLNAQ6ZTI6 216 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 RFX8Q6ZV50 586 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 Q6ZVL8 140 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 CACNA2D3Q8IZS8 1091 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 NAGSQ8N159 534 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 ARFGAP1Q8N6T3 406 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 ANKRD20A12PQ8NF67 263 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 SMIM14Q96QK8 99 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 CTRCQ99895 268 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 ZNF71Q9NQZ8 489 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 DONSONQ9NYP3 566 aa11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 LIMA1Q9UHB6 759 aaKnown RBP11.94□□□□□ -0.5
TRAFD1-205ENST00000548277 BSNQ9UPA5 3926 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 NAV2Q8IVL1 2488 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 NKX2-8O15522 239 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 ZW10O43264 779 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 CPP00450 1065 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 VIPR1P32241 457 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 ADCY8P40145 1251 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 ACTR1BP42025 376 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 GPR1P46091 355 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 RENBPP51606 427 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 POLE2P56282 527 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 ACTR1AP61163 376 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 CDK3Q00526 305 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 MYL5Q02045 173 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 SRSF1Q07955 248 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 ZNF235Q14590 738 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 STX1AQ16623 288 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 ANKS6Q68DC2 871 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 BORAQ6PGQ7 559 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 TSPAN33Q86UF1 283 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 TRIM74Q86UV6 250 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 UNC5BQ8IZJ1 945 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 PGBD5Q8N414 524 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 AHCYL2Q96HN2 611 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 TEX101Q9BY14 249 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 TRIM7Q9C029 511 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 KCNK4Q9NYG8 393 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 SEPT3Q9UH03 358 aa11.93□□□□□ -0.5
TRAFD1-205ENST00000548277 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 LGALS16A8MUM7 142 aa11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 DUX1O43812 170 aa11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 RAD1O60671 282 aa11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 RNF8O76064 485 aa11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 HEXIM1O94992 359 aaKnown RBP11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 LHCGRP22888 699 aa11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 AMPD1P23109 780 aa11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 MIPP30301 263 aa11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 CSF2RBP32927 897 aa11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 AP1S1P61966 158 aa11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 TRAF2Q12933 501 aa11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 KCNAB2Q13303 367 aa11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 MAMLD1Q13495 774 aa11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 RFTN1Q14699 578 aaPredicted RBP11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 C17orf82Q86X59 251 aaPredicted RBP11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 AGBL5Q8NDL9 886 aa11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 FRMD8Q9BZ67 464 aaPredicted RBP11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 NOD2Q9HC29 1040 aa11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 TRNAU1APQ9NX07 287 aaKnown RBP11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 CWC15Q9P013 229 aaKnown RBP11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 KLHL3Q9UH77 587 aa11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 PRKAB1Q9Y478 270 aa11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 TNRC6AQ8NDV7 1962 aaKnown RBP11.92□□□□□ -0.5
TRAFD1-205ENST00000548277 IGHV1OR21-1A0A087WYE8 117 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 NPIPB15A6NHN6 443 aaPredicted RBP11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 LRRC10BA6NIK2 292 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 HGSO14964 777 aaPredicted RBP11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 INPP4BO15327 924 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 PRPSAP2O60256 369 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 ASMTLO95671 621 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 CYP2A6P11509 494 aaPredicted RBP11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 HTR7P34969 479 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 MAPK9P45984 424 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 CCR10P46092 362 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 ITKQ08881 620 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 NCAPHQ15003 741 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 CCDC183Q5T5S1 534 aa11.91□□□□□ -0.5
TRAFD1-205ENST00000548277 DCAF12Q5T6F0 453 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms