RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 SEMA3CQ99985 751 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 FOXP3Q9BZS1 431 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 PRORYQ9H606 182 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 WDR26Q9H7D7 661 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 ZFAND3Q9H8U3 227 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 CARS2Q9HA77 564 aaKnown RBP6.71□□□□□ -1.34
SCAF11-211ENST00000547950 EPB41L5Q9HCM4 733 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 FGF22Q9HCT0 170 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 THSD1Q9NS62 852 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 TTLL3Q9Y4R7 772 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 DGKBQ9Y6T7 804 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 TMEM131Q92545 1883 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 PLXNB3Q9ULL4 1909 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 A0A1W2PQ67 120 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 NPIPB15A6NHN6 443 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-211ENST00000547950 TNFRSF10CO14798 259 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 SOCS5O75159 536 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 TCEA3O75764 348 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 HEXIM1O94992 359 aaKnown RBP6.7□□□□□ -1.34
SCAF11-211ENST00000547950 PGLSO95336 258 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 FUCA1P04066 466 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 PRB1P04280 392 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 RPLP0P05388 317 aaKnown RBP6.7□□□□□ -1.34
SCAF11-211ENST00000547950 PDHA1P08559 390 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 HOXC4P09017 264 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-211ENST00000547950 CYP2A6P11509 494 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-211ENST00000547950 KRT10P13645 584 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 CR2P20023 1033 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 LHCGRP22888 699 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 NFKBIAP25963 317 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 SERPINB6P35237 376 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 GNPDA1P46926 289 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 POLD2P49005 469 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 ARSEP51690 589 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 EPHB1P54762 984 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 TAS2R40P59535 323 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 KIAA1024LP59773 190 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 ERVPABLB-1P60509 514 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 DPYSL3Q14195 570 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 CNGA3Q16281 694 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 ZSCAN23Q3MJ62 389 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 C4orf48Q5BLP8 95 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 ANKRD20A8PQ5CZ79 823 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 ARHGAP40Q5TG30 622 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 OGFOD3Q6PK18 319 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 DOK6Q6PKX4 331 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 RFLNAQ6ZTI6 216 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 USP45Q70EL2 814 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 GPR155Q7Z3F1 870 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 B3GNT8Q7Z7M8 397 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 TSPAN33Q86UF1 283 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 HEATR4Q86WZ0 1026 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 LRRC49Q8IUZ0 686 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 MAP7D3Q8IWC1 876 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 NDUFAF2Q8N183 169 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 ARL14Q8N4G2 192 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 TEX26Q8N6G2 289 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 CCNYQ8ND76 341 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 OR6C4Q8NGE1 309 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 OR8K1Q8NGG5 319 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 WDR36Q8NI36 951 aaKnown RBP6.7□□□□□ -1.34
SCAF11-211ENST00000547950 WDR48Q8TAF3 677 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 ZNF564Q8TBZ8 553 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-211ENST00000547950 PIH1D2Q8WWB5 315 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 KCNE4Q8WWG9 221 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 IQCDQ96DY2 449 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 SCRN2Q96FV2 425 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 PRR11Q96HE9 360 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-211ENST00000547950 HIC2Q96JB3 615 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 CDK15Q96Q40 435 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 UBL7Q96S82 380 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-211ENST00000547950 MGME1Q9BQP7 344 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 PACSIN1Q9BY11 444 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 XPO4Q9C0E2 1151 aaKnown RBP6.7□□□□□ -1.34
SCAF11-211ENST00000547950 STRADBQ9C0K7 418 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 LRRN3Q9H3W5 708 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 DEF6Q9H4E7 631 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 CPNE5Q9HCH3 593 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 ASCL3Q9NQ33 180 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 PHPT1Q9NRX4 125 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-211ENST00000547950 SPATS2LQ9NUQ6 558 aaKnown RBP6.7□□□□□ -1.34
SCAF11-211ENST00000547950 RBM22Q9NW64 420 aaKnown RBP eCLIP6.7□□□□□ -1.34
SCAF11-211ENST00000547950 RCOR3Q9P2K3 495 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-211ENST00000547950 LRIT1Q9P2V4 623 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 CD84Q9UIB8 345 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 ATXN7L1Q9ULK2 861 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-211ENST00000547950 TMEM98Q9Y2Y6 226 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.7□□□□□ -1.344e-7■□□□□ 9
SCAF11-211ENST00000547950 RNF215Q9Y6U7 377 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 COL5A1P20908 1838 aaPredicted RBP6.7□□□□□ -1.34
SCAF11-211ENST00000547950 CACNA1GO43497 2377 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 NBEAQ8NFP9 2946 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 WDFY3Q8IZQ1 3526 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 APC2O95996 2303 aa6.7□□□□□ -1.34
SCAF11-211ENST00000547950 FAM208BQ5VWN6 2430 aa6.69□□□□□ -1.34
SCAF11-211ENST00000547950 URB1O60287 2271 aaKnown RBP6.69□□□□□ -1.34
SCAF11-211ENST00000547950 CCDC187A0A096LP49 1063 aa6.69□□□□□ -1.34
SCAF11-211ENST00000547950 A0A1W2PQM1 296 aa6.69□□□□□ -1.34
SCAF11-211ENST00000547950 PRSS38A1L453 326 aa6.69□□□□□ -1.34
SCAF11-211ENST00000547950 RHPN2P1A8MT19 583 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms