RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 NDST3O95803 873 aa23.24■■□□□ 1.31
CTDSP2-203ENST00000547701 PCCBP05166 539 aa23.24■■□□□ 1.31
CTDSP2-203ENST00000547701 MYCLP1P12525 358 aaPredicted RBP23.24■■□□□ 1.31
CTDSP2-203ENST00000547701 CKMT1AP12532 417 aa23.24■■□□□ 1.31
CTDSP2-203ENST00000547701 SMAD1Q15797 465 aaKnown RBP23.24■■□□□ 1.31
CTDSP2-203ENST00000547701 ALG11Q2TAA5 492 aa23.24■■□□□ 1.31
CTDSP2-203ENST00000547701 HS1BP3Q53T59 392 aa23.24■■□□□ 1.31
CTDSP2-203ENST00000547701 ZCCHC8Q6NZY4 707 aaKnown RBP23.24■■□□□ 1.31
CTDSP2-203ENST00000547701 KDELC1Q6UW63 502 aa23.24■■□□□ 1.31
CTDSP2-203ENST00000547701 TMPRSS7Q7RTY8 843 aa23.24■■□□□ 1.31
CTDSP2-203ENST00000547701 HAUS1Q96CS2 278 aa23.24■■□□□ 1.31
CTDSP2-203ENST00000547701 CEP41Q9BYV8 373 aa23.24■■□□□ 1.31
CTDSP2-203ENST00000547701 SLC13A1Q9BZW2 595 aa23.24■■□□□ 1.31
CTDSP2-203ENST00000547701 ABCG8Q9H221 673 aa23.24■■□□□ 1.31
CTDSP2-203ENST00000547701 SEPT10Q9P0V9 454 aa23.24■■□□□ 1.31
CTDSP2-203ENST00000547701 APOBEC3BQ9UH17 382 aaKnown RBP23.24■■□□□ 1.31
CTDSP2-203ENST00000547701 ARHGEF17Q96PE2 2063 aaPredicted RBP23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 NRDCO43847 1150 aa23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 SRP54P61011 504 aaKnown RBP23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 FOXC1Q12948 553 aa23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 MPP3Q13368 585 aa23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 ZNF542PQ5EBM4 170 aa23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 ENPP7Q6UWV6 458 aa23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 ADAMTSL4Q6UY14 1074 aa23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 CDKL3Q8IVW4 592 aaPredicted RBP23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 KLHDC8BQ8IXV7 354 aa23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 PELI3Q8N2H9 469 aa23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 LPCAT1Q8NF37 534 aa23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 OR56A4Q8NGH8 313 aa23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 SCARF2Q96GP6 870 aaPredicted RBP23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 LRRC61Q9BV99 259 aa23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 SCNM1Q9BWG6 230 aa23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 BOCQ9BWV1 1114 aa23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 PHPT1Q9NRX4 125 aaPredicted RBP23.23■■□□□ 1.31
CTDSP2-203ENST00000547701 FTCDO95954 541 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 MT-CYBP00156 380 aaPredicted RBP23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 SOD1P00441 154 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 GP1BAP07359 652 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 RBP3P10745 1247 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 RBL1P28749 1068 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 SPINT3P49223 89 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 PTPRRQ15256 657 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 ELOCQ15369 112 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 FAXCQ5TGI0 409 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 PID1Q7Z2X4 250 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 TMC3Q7Z5M5 1100 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 GALNT15Q8N3T1 639 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 SPATA22Q8NHS9 363 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 DTX3LQ8TDB6 740 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 TMEM121BQ9BXQ6 578 aaPredicted RBP23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 FRMD8Q9BZ67 464 aaPredicted RBP23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 CLPBQ9H078 707 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 EVA1BQ9NVM1 165 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 KLQ9UEF7 1012 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 GUCA1BQ9UMX6 200 aa23.22■■□□□ 1.31
CTDSP2-203ENST00000547701 LY6G6EA0A0G2JKS1 128 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 GOLGA6L9A6NEM1 432 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 TMEM202A6NGA9 273 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 HYAL3O43820 417 aaPredicted RBP23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 GCATO75600 419 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 RFPL3O75679 317 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 CLDN7O95471 211 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 NFKB1P19838 968 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 DUSP3P51452 185 aaPredicted RBP23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 DCDC1P59894 354 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 EIF3EP60228 445 aaKnown RBP23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 CDK3Q00526 305 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 PRRT3Q5FWE3 981 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 CCDC181Q5TID7 509 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 AADACL2Q6P093 401 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 B4GALNT4Q76KP1 1039 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 RBFAQ8N0V3 343 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 CHCHD4Q8N4Q1 142 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 CCHCR1Q8TD31 782 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 AP2M1Q96CW1 435 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 APOLD1Q96LR9 279 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 PPP1R2P1Q96PQ5 205 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 SMIM14Q96QK8 99 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 LGR4Q9BXB1 951 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 FRMD8P1Q9BZ68 369 aaPredicted RBP23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 TCEAL2Q9H3H9 227 aaPredicted RBP23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 TRABDQ9H4I3 376 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 ZFYVE1Q9HBF4 777 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 RAD18Q9NS91 495 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 KLHL8Q9P2G9 620 aaPredicted RBP23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 PACSIN2Q9UNF0 486 aaPredicted RBP23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 SLC17A4Q9Y2C5 497 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 U3KQA8 63 aa23.21■■□□□ 1.31
CTDSP2-203ENST00000547701 C1orf232A0A0U1RR37 186 aa23.2■■□□□ 1.3
CTDSP2-203ENST00000547701 GOLGA6L3A6NEY3 463 aa23.2■■□□□ 1.3
CTDSP2-203ENST00000547701 H7C0C1 242 aa23.2■■□□□ 1.3
CTDSP2-203ENST00000547701 TNFP01375 233 aa23.2■■□□□ 1.3
CTDSP2-203ENST00000547701 ATP5OP48047 213 aa23.2■■□□□ 1.3
CTDSP2-203ENST00000547701 E2F1Q01094 437 aa23.2■■□□□ 1.3
CTDSP2-203ENST00000547701 C6orf132Q5T0Z8 1188 aa23.2■■□□□ 1.3
CTDSP2-203ENST00000547701 HENMT1Q5T8I9 393 aaKnown RBP23.2■■□□□ 1.3
CTDSP2-203ENST00000547701 MEI1Q5TIA1 1274 aa23.2■■□□□ 1.3
CTDSP2-203ENST00000547701 ITPRIPL1Q6GPH6 555 aa23.2■■□□□ 1.3
CTDSP2-203ENST00000547701 CCDC70Q6NSX1 233 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms