RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 ACSS3Q9H6R3 686 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 VIPAS39Q9H9C1 493 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 PIH1D1Q9NWS0 290 aaKnown RBP16■□□□□ 0.15
PRPF40A-212ENST00000545856 MOCS1Q9NZB8 636 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 CACNA1IQ9P0X4 2223 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 SPINT1O43278 529 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 SPAM1P38567 509 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 SPINT3P49223 89 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 ADPRHP54922 357 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 DPTQ07507 201 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 MGAT5Q09328 741 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 ITGA9Q13797 1035 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 RASA2Q15283 850 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 KYNUQ16719 465 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16■□□□□ 0.15
PRPF40A-212ENST00000545856 ANKMY2Q8IV38 441 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 CNTN4Q8IWV2 1026 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 DENND6BQ8NEG7 585 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 OR4K2Q8NGD2 314 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 GPR150Q8NGU9 434 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 OR2T34Q8NGX1 318 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 GANCQ8TET4 914 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 HMGB4Q8WW32 186 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 CDKN2AIPNLQ96HQ2 116 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 TCF12Q99081 682 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 ZSCAN5AQ9BUG6 496 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 VPS37BQ9H9H4 285 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 POLR3BQ9NW08 1133 aaPredicted RBP16■□□□□ 0.15
PRPF40A-212ENST00000545856 ARL5AQ9Y689 179 aa16■□□□□ 0.15
PRPF40A-212ENST00000545856 TCRBV9S1A1TA0A576 114 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 C10orf142B7Z368 130 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 WNT9AO14904 365 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 TCEA3O75764 348 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 CLDN7O95471 211 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 PIRTP0C851 137 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 OGNP20774 298 aaKnown RBP15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 HSD17B3P37058 310 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 LIG3P49916 1009 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 TAS2R38P59533 333 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 CRADDP78560 199 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 PTSQ03393 145 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 RNF187Q5TA31 235 aaPredicted RBP15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 LYPLAL1Q5VWZ2 237 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 ANO7Q6IWH7 933 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 MRNIPQ6NTE8 343 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 FBXO38Q6PIJ6 1188 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 CERS6Q6ZMG9 384 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 SLC26A11Q86WA9 606 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 IGDCC3Q8IVU1 814 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 PGBD3Q8N328 593 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 MFSD3Q96ES6 412 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 DTD2Q96FN9 168 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 CFAP36Q96G28 342 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 SPACA7Q96KW9 195 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 COQ10AQ96MF6 247 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 TTC1Q99614 292 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 SMOXQ9NWM0 555 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 FBXO4Q9UKT5 387 aa15.99■□□□□ 0.15
PRPF40A-212ENST00000545856 VCANP13611 3396 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 AGAP14A8MT82 685 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 TOR1BO14657 336 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 ATP8B1O43520 1251 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 TM7SF2O76062 418 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 DCNP07585 359 aaKnown RBP15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 ITGALP20701 1170 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 NMBRP28336 390 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 ARCN1P48444 511 aaKnown RBP15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 CCR5P51681 352 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 METAP1P53582 386 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 GPX6P59796 221 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 ZNF284Q2VY69 593 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 TMEM259Q4ZIN3 620 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 ALS2CLQ60I27 953 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 ESRP1Q6NXG1 681 aaKnown RBP15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 LRIG3Q6UXM1 1119 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 SLC36A4Q6YBV0 504 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 HDXQ7Z353 690 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 TECPR1Q7Z6L1 1165 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 TSPAN33Q86UF1 283 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 KCNMB4Q86W47 210 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 HORMAD1Q86X24 394 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 RIBC1Q8N443 379 aaPredicted RBP15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 FBXL6Q8N531 539 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 OR4L1Q8NH43 312 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 OR14C36Q8NHC7 312 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 FAM174AQ8TBP5 190 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 HEXDCQ8WVB3 486 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 UBLCP1Q8WVY7 318 aaPredicted RBP15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 ULK4Q96C45 1275 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 DNAJC1Q96KC8 554 aaKnown RBP15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 TMEM109Q9BVC6 243 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 ROPN1BQ9BZX4 212 aaPredicted RBP15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 FAM83DQ9H4H8 585 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 ROPN1Q9HAT0 212 aaPredicted RBP15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 ZFATQ9P243 1243 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 SERGEFQ9UGK8 458 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 SLC24A2Q9UI40 661 aa15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 CORO1CQ9ULV4 474 aaPredicted RBP15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.98■□□□□ 0.15
PRPF40A-212ENST00000545856 NUMA1Q14980 2115 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms