RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 MFSD1Q9H3U5 465 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 TUBB1Q9H4B7 451 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 VPS45Q9NRW7 570 aa15.8■□□□□ 0.12
LDLR-204ENST00000545707 MUSKO15146 869 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 H6PDO95479 791 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 ATXN1LP0C7T5 689 aaKnown RBP15.79■□□□□ 0.12
LDLR-204ENST00000545707 LRRC23Q53EV4 343 aaPredicted RBP15.79■□□□□ 0.12
LDLR-204ENST00000545707 IFNEQ86WN2 208 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 THEM5Q8N1Q8 247 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 OR2T34Q8NGX1 318 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 OR2T3Q8NH03 318 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 ARRDC2Q8TBH0 407 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 TWIST2Q8WVJ9 160 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 TOP1MTQ969P6 601 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 L3HYPDHQ96EM0 354 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 CCDC162PA2VCL2 907 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 M0QZQ0 153 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 SOAT2O75908 522 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 SEC24DO94855 1032 aaPredicted RBP15.79■□□□□ 0.12
LDLR-204ENST00000545707 CLIC3O95833 236 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 SLC2A3P11169 496 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 MTHFD2P13995 350 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 ACVRL1P37023 503 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 THPOP40225 353 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 DIO3P55073 304 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 CREB5Q02930 508 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 GALNT1Q10472 559 aaPredicted RBP15.79■□□□□ 0.12
LDLR-204ENST00000545707 NHSL2Q5HYW2 709 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 TBCELQ5QJ74 424 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 SPRYD7Q5W111 196 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 RAP1GAP2Q684P5 730 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 SCIMPQ6UWF3 145 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 SLC15A3Q8IY34 581 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 UMODL1-AS1Q8N2C9 162 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 CBR4Q8N4T8 237 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 TUBGCP3Q96CW5 907 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 MYEOVQ96EZ4 313 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 SERPINB11Q96P15 392 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 SEMA3CQ99985 751 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 MYRFQ9Y2G1 1151 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 TIMM22Q9Y584 194 aa15.79■□□□□ 0.12
LDLR-204ENST00000545707 FNDC1Q4ZHG4 1894 aaPredicted RBP15.79■□□□□ 0.12
LDLR-204ENST00000545707 SCN4AP35499 1836 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 H3BNH8 94 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 CDK4P11802 303 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 OXTRP30559 389 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 TBX4P57082 545 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 YWHAHQ04917 246 aaPredicted RBP15.78■□□□□ 0.12
LDLR-204ENST00000545707 BEND5Q7L4P6 421 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 MRPL10Q7Z7H8 261 aaKnown RBP15.78■□□□□ 0.12
LDLR-204ENST00000545707 ZNF683Q8IZ20 524 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 TTC9BQ8N6N2 239 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 PPP1R2P1Q96PQ5 205 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 SMIM14Q96QK8 99 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 ADAM2Q99965 735 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 TRIM62Q9BVG3 475 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 ZYG11BQ9C0D3 744 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 UPF3AQ9H1J1 476 aaKnown RBP15.78■□□□□ 0.12
LDLR-204ENST00000545707 PREBQ9HCU5 417 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 SEMA4BQ9NPR2 832 aaPredicted RBP15.78■□□□□ 0.12
LDLR-204ENST00000545707 CMTM6Q9NX76 183 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 IKZF3Q9UKT9 509 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 FAM50BQ9Y247 325 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 AZIN1O14977 448 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 CD3EAPO15446 510 aaKnown RBP15.78■□□□□ 0.12
LDLR-204ENST00000545707 TRMUO75648 421 aaKnown RBP15.78■□□□□ 0.12
LDLR-204ENST00000545707 GLP2RO95838 553 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 MTHFD1P11586 935 aaKnown RBP15.78■□□□□ 0.12
LDLR-204ENST00000545707 GFAPP14136 432 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 HGFP14210 728 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 RANBP1P43487 201 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 FBXL22Q6P050 247 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 FIBCD1Q8N539 461 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 PCYOX1LQ8NBM8 494 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 RNF217Q8TC41 542 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 VPS33AQ96AX1 596 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 RMND5BQ96G75 393 aaPredicted RBP15.78■□□□□ 0.12
LDLR-204ENST00000545707 UHRF1Q96T88 793 aaPredicted RBP15.78■□□□□ 0.12
LDLR-204ENST00000545707 GPATCH1Q9BRR8 931 aaKnown RBP15.78■□□□□ 0.12
LDLR-204ENST00000545707 TRMOQ9BU70 441 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 EFHD1Q9BUP0 239 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 PRDM5Q9NQX1 630 aaPredicted RBP15.78■□□□□ 0.12
LDLR-204ENST00000545707 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.78■□□□□ 0.12
LDLR-204ENST00000545707 GMIPQ9P107 970 aa15.78■□□□□ 0.12
LDLR-204ENST00000545707 NCF1BA6NI72 391 aaPredicted RBP15.77■□□□□ 0.12
LDLR-204ENST00000545707 NCF1CA8MVU1 366 aaPredicted RBP15.77■□□□□ 0.12
LDLR-204ENST00000545707 FXYD1O00168 92 aa15.77■□□□□ 0.12
LDLR-204ENST00000545707 TMCC1O94876 653 aa15.77■□□□□ 0.12
LDLR-204ENST00000545707 PAPSS2O95340 614 aaPredicted RBP15.77■□□□□ 0.12
LDLR-204ENST00000545707 HSPA8P11142 646 aaKnown RBP15.77■□□□□ 0.12
LDLR-204ENST00000545707 NCF1P14598 390 aaPredicted RBP15.77■□□□□ 0.12
LDLR-204ENST00000545707 ZNF23P17027 643 aa15.77■□□□□ 0.12
LDLR-204ENST00000545707 FDXRP22570 491 aa15.77■□□□□ 0.12
LDLR-204ENST00000545707 HTR7P34969 479 aa15.77■□□□□ 0.12
LDLR-204ENST00000545707 ACADVLP49748 655 aa15.77■□□□□ 0.12
LDLR-204ENST00000545707 TUSC3Q13454 348 aa15.77■□□□□ 0.12
LDLR-204ENST00000545707 EPHX4Q8IUS5 362 aa15.77■□□□□ 0.12
LDLR-204ENST00000545707 KLHDC9Q8NEP7 349 aa15.77■□□□□ 0.12
LDLR-204ENST00000545707 DNAJB14Q8TBM8 379 aa15.77■□□□□ 0.12
LDLR-204ENST00000545707 ESAMQ96AP7 390 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms