RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 GARSP41250 739 aaKnown RBP15.34■□□□□ 0.05
CLSTN3-216ENST00000545663 ACTR1BP42025 376 aa15.34■□□□□ 0.05
CLSTN3-216ENST00000545663 PTGIRP43119 386 aa15.34■□□□□ 0.05
CLSTN3-216ENST00000545663 ACTR1AP61163 376 aa15.34■□□□□ 0.05
CLSTN3-216ENST00000545663 NFATC2Q13469 925 aa15.34■□□□□ 0.05
CLSTN3-216ENST00000545663 RAPSNQ13702 412 aa15.34■□□□□ 0.05
CLSTN3-216ENST00000545663 FOXD4L6Q3SYB3 417 aaPredicted RBP15.34■□□□□ 0.05
CLSTN3-216ENST00000545663 BRMS1LQ5PSV4 323 aa15.34■□□□□ 0.05
CLSTN3-216ENST00000545663 FOXD4L3Q6VB84 417 aaPredicted RBP15.34■□□□□ 0.05
CLSTN3-216ENST00000545663 RASGRP3Q8IV61 690 aa15.34■□□□□ 0.05
CLSTN3-216ENST00000545663 NT5C1BQ96P26 610 aa15.34■□□□□ 0.05
CLSTN3-216ENST00000545663 OR6C1Q96RD1 312 aa15.34■□□□□ 0.05
CLSTN3-216ENST00000545663 NPY6RQ99463 290 aa15.34■□□□□ 0.05
CLSTN3-216ENST00000545663 DNAI1Q9UI46 699 aa15.34■□□□□ 0.05
CLSTN3-216ENST00000545663 MFHAS1Q9Y4C4 1052 aa15.34■□□□□ 0.05
CLSTN3-216ENST00000545663 GOLGA6L4A6NEF3 574 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 ZNF185O15231 689 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 BUB1O43683 1085 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 DAB1O75553 588 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 ITGA3P26006 1051 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 CLCN1P35523 988 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 SUOXP51687 545 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 RAD51Q06609 339 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 RALGDSQ12967 914 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 RESP18Q5W5W9 173 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 ERAP2Q6P179 960 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 OLFML1Q6UWY5 402 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 PHLDB2Q86SQ0 1253 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 ZNF606Q8WXB4 792 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 KREMEN1Q96MU8 473 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 GBP4Q96PP9 640 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 KLC2Q9H0B6 622 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 METTL14Q9HCE5 456 aaKnown RBP15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 LHX9Q9NQ69 397 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 COPG2Q9UBF2 871 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 PCDHGB7Q9Y5F8 929 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 DOCK4Q8N1I0 1966 aa15.33■□□□□ 0.04
CLSTN3-216ENST00000545663 TSPAN11A1L157 253 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 CETN3O15182 167 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 SPAG6O75602 509 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 TIAF1O95411 115 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 IGSF6O95976 241 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 MYCLP1P12525 358 aaPredicted RBP15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 KRT5P13647 590 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 FASLGP48023 281 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 SULT1E1P49888 294 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 NDST2P52849 883 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 GFERP55789 205 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 PER3P56645 1201 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 GEMIN4P57678 1058 aaKnown RBP15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 RHOAP61586 193 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 CRB2Q5IJ48 1285 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 LIPIQ6XZB0 460 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 LMO3Q8TAP4 145 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 SLC35C1Q96A29 364 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 TBCBQ99426 244 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 BARD1Q99728 777 aaKnown RBP15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 FRMD8Q9BZ67 464 aaPredicted RBP15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 SUV39H2Q9H5I1 410 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 FAM13BQ9NYF5 915 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 PCDHA7Q9UN72 937 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 ATP8A1Q9Y2Q0 1164 aa15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 COPG1Q9Y678 874 aaKnown RBP15.32■□□□□ 0.04
CLSTN3-216ENST00000545663 C21orf140B9A014 251 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 GOLGA6L22H0YM25 854 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 PDE2AO00408 941 aaPredicted RBP15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 THAP12O43422 761 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 NADKO95544 446 aaPredicted RBP15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 ERBB2P04626 1255 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 PTPN4P29074 926 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 SEPHS1P49903 392 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 DEUP1Q05D60 604 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 LAMB3Q13751 1172 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 MIIPQ5JXC2 388 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 FAM69BQ5VUD6 431 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 CLEC17AQ6ZS10 378 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 C11orf57Q6ZUT1 292 aaPredicted RBP15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 CAMK1DQ8IU85 385 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 PASD1Q8IV76 773 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 SMYD4Q8IYR2 804 aaPredicted RBP15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 ZNF295-AS1Q8N0V1 137 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 SFRP1Q8N474 314 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 NANOS1Q8WY41 292 aaKnown RBP15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 INPP5DQ92835 1189 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 CCDC34Q96HJ3 373 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 NCAPGQ9BPX3 1015 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 MAGEB5Q9BZ81 275 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 TRIM8Q9BZR9 551 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 HPCAL4Q9UM19 191 aa15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 ZNF469Q96JG9 3925 aaPredicted RBP15.31■□□□□ 0.04
CLSTN3-216ENST00000545663 CXorf51AA0A1B0GTR3 108 aa15.3■□□□□ 0.04
CLSTN3-216ENST00000545663 KDELR3O43731 214 aa15.3■□□□□ 0.04
CLSTN3-216ENST00000545663 PRICKLE3O43900 615 aaPredicted RBP15.3■□□□□ 0.04
CLSTN3-216ENST00000545663 PTGER4P35408 488 aa15.3■□□□□ 0.04
CLSTN3-216ENST00000545663 FMO5P49326 533 aa15.3■□□□□ 0.04
CLSTN3-216ENST00000545663 ACOX1Q15067 660 aa15.3■□□□□ 0.04
CLSTN3-216ENST00000545663 DOK6Q6PKX4 331 aa15.3■□□□□ 0.04
CLSTN3-216ENST00000545663 UBE2Q2Q8WVN8 375 aa15.3■□□□□ 0.04
CLSTN3-216ENST00000545663 TBC1D10AQ9BXI6 508 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms