RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 SNX21Q969T3 373 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 TCTN2Q96GX1 697 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 ZNF641Q96N77 438 aaPredicted RBP9.38□□□□□ -0.91
CHD4-212ENST00000545083 TEX101Q9BY14 249 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 TRIM55Q9BYV6 548 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 ZMYND15Q9H091 742 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 TRIT1Q9H3H1 467 aaKnown RBP9.38□□□□□ -0.91
CHD4-212ENST00000545083 ZNF768Q9H5H4 540 aaKnown RBP9.38□□□□□ -0.91
CHD4-212ENST00000545083 RETREG1Q9H6L5 497 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 SIX2Q9NPC8 291 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 TMEM51Q9NW97 253 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 MAN1B1Q9UKM7 699 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 CTNND2Q9UQB3 1225 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 POLHQ9Y253 713 aa9.38□□□□□ -0.91
CHD4-212ENST00000545083 OAS3Q9Y6K5 1087 aaKnown RBP9.38□□□□□ -0.91
CHD4-212ENST00000545083 AKAP9Q99996 3911 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 TNRC6AQ8NDV7 1962 aaKnown RBP9.37□□□□□ -0.91
CHD4-212ENST00000545083 CDC14CA4D256 554 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 WIPF3A6NGB9 483 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 TCP11X1B4DZS4 312 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 PDE2AO00408 941 aaPredicted RBP9.37□□□□□ -0.91
CHD4-212ENST00000545083 EML2O95834 649 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 HSP90AA1P07900 732 aaKnown RBP9.37□□□□□ -0.91
CHD4-212ENST00000545083 ELAVL4P26378 380 aaKnown RBP9.37□□□□□ -0.91
CHD4-212ENST00000545083 DLSTP36957 453 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 ACTR1BP42025 376 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 ACTR1AP61163 376 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 RAPGEF1Q13905 1077 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 ACOX1Q15067 660 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 CCDC14Q49A88 953 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 CFAP58Q5T655 872 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 C1QL3Q5VWW1 255 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 DPPA4Q7L190 304 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 PYROXD2Q8N2H3 581 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 RTL3Q8N8U3 475 aaKnown RBP9.37□□□□□ -0.91
CHD4-212ENST00000545083 ECHDC3Q96DC8 303 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 CCDC34Q96HJ3 373 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 COQ10AQ96MF6 247 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 PHF12Q96QT6 1004 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 ZPBPQ9BS86 351 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 PDFQ9HBH1 243 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 METTL5Q9NRN9 209 aaKnown RBP9.37□□□□□ -0.91
CHD4-212ENST00000545083 PHPT1Q9NRX4 125 aaPredicted RBP9.37□□□□□ -0.91
CHD4-212ENST00000545083 SIDT1Q9NXL6 827 aaKnown RBP9.37□□□□□ -0.91
CHD4-212ENST00000545083 RCOR3Q9P2K3 495 aaPredicted RBP9.37□□□□□ -0.91
CHD4-212ENST00000545083 UBA2Q9UBT2 640 aaPredicted RBP9.37□□□□□ -0.91
CHD4-212ENST00000545083 ERRFI1Q9UJM3 462 aaPredicted RBP9.37□□□□□ -0.91
CHD4-212ENST00000545083 DNAJC12Q9UKB3 198 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 CROTQ9UKG9 612 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 SLC17A4Q9Y2C5 497 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 PCDHB3Q9Y5E6 796 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 APCP25054 2843 aa9.37□□□□□ -0.91
CHD4-212ENST00000545083 ZNF106Q9H2Y7 1883 aaKnown RBP9.36□□□□□ -0.91
CHD4-212ENST00000545083 J3KR12 359 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 KATNA1O75449 491 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 MAP3K6O95382 1288 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 GNA14O95837 355 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 LDLRP01130 860 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 PON1P27169 355 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 FASLGP48023 281 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 PPM1FP49593 454 aaPredicted RBP9.36□□□□□ -0.91
CHD4-212ENST00000545083 HDAC4P56524 1084 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 CDK3Q00526 305 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 MAP7Q14244 749 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 GRM3Q14832 879 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 INPP5JQ15735 1006 aaPredicted RBP9.36□□□□□ -0.91
CHD4-212ENST00000545083 CNGA3Q16281 694 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 EXOC3L4Q17RC7 722 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.36□□□□□ -0.91
CHD4-212ENST00000545083 TAF3Q5VWG9 929 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 DOK6Q6PKX4 331 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 WDR74Q6RFH5 385 aaPredicted RBP9.36□□□□□ -0.91
CHD4-212ENST00000545083 GBP6Q6ZN66 633 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 ARCQ7LC44 396 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 APLFQ8IW19 511 aaPredicted RBP9.36□□□□□ -0.91
CHD4-212ENST00000545083 FAM71AQ8IYT1 594 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 GALNT6Q8NCL4 622 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 OR10G6Q8NH81 332 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 JOSD2Q8TAC2 188 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 GPT2Q8TD30 523 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 RXFP2Q8WXD0 754 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 NCSTNQ92542 709 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 NUS1Q96E22 293 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 AHCYL2Q96HN2 611 aaKnown RBP9.36□□□□□ -0.91
CHD4-212ENST00000545083 FAM81BQ96LP2 452 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 TUBGCP5Q96RT8 1024 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 SLC38A3Q99624 504 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 B4GALT6Q9UBX8 382 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 KLHL3Q9UH77 587 aa9.36□□□□□ -0.91
CHD4-212ENST00000545083 TRAFD1O14545 582 aaPredicted RBP9.35□□□□□ -0.91
CHD4-212ENST00000545083 POLR1CO15160 346 aaPredicted RBP9.35□□□□□ -0.91
CHD4-212ENST00000545083 IVLP07476 585 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 CYP11B1P15538 503 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 EPHB2P29323 1055 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 SERPINA4P29622 427 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 MAN1A1P33908 653 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 ETV3P41162 512 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 YBEYP58557 167 aaPredicted RBP9.35□□□□□ -0.91
CHD4-212ENST00000545083 CHAF1BQ13112 559 aa9.35□□□□□ -0.91
CHD4-212ENST00000545083 NFATC2Q13469 925 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms