RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 DDR2Q16832 855 aa12.45□□□□□ -0.42
PAAF1-215ENST00000544909 AGKQ53H12 422 aa12.45□□□□□ -0.42
PAAF1-215ENST00000544909 UNC50Q53HI1 259 aa12.45□□□□□ -0.42
PAAF1-215ENST00000544909 AARS2Q5JTZ9 985 aaKnown RBP12.45□□□□□ -0.42
PAAF1-215ENST00000544909 RAP1GAP2Q684P5 730 aa12.45□□□□□ -0.42
PAAF1-215ENST00000544909 CYHR1Q6ZMK1 362 aa12.45□□□□□ -0.42
PAAF1-215ENST00000544909 ZNF783Q6ZMS7 281 aa12.45□□□□□ -0.42
PAAF1-215ENST00000544909 PRR23BQ6ZRT6 265 aa12.45□□□□□ -0.42
PAAF1-215ENST00000544909 CHST9Q7L1S5 443 aa12.45□□□□□ -0.42
PAAF1-215ENST00000544909 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.45□□□□□ -0.42
PAAF1-215ENST00000544909 HIPK4Q8NE63 616 aa12.45□□□□□ -0.42
PAAF1-215ENST00000544909 HMGCLL1Q8TB92 370 aa12.45□□□□□ -0.42
PAAF1-215ENST00000544909 SGF29Q96ES7 293 aa12.45□□□□□ -0.42
PAAF1-215ENST00000544909 TMA16Q96EY4 203 aaKnown RBP12.45□□□□□ -0.42
PAAF1-215ENST00000544909 KLHL5Q96PQ7 755 aa12.45□□□□□ -0.42
PAAF1-215ENST00000544909 GPATCH1Q9BRR8 931 aaKnown RBP12.45□□□□□ -0.42
PAAF1-215ENST00000544909 TMEM175Q9BSA9 504 aa12.45□□□□□ -0.42
PAAF1-215ENST00000544909 CWH43Q9H720 699 aa12.45□□□□□ -0.42
PAAF1-215ENST00000544909 SDR39U1Q9NRG7 319 aaPredicted RBP12.45□□□□□ -0.42
PAAF1-215ENST00000544909 ILVBLA1L0T0 632 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 MTMR11A4FU01 709 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 H7C0S8 307 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 FBP2O00757 339 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 AZIN1O14977 448 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 CFLARO15519 480 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 B4GALT3O60512 393 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 CLDN11O75508 207 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 MLYCDO95822 493 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 PMLP29590 882 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 SLC11A2P49281 568 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 PKNOX1P55347 436 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 MAXP61244 160 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 TAF10Q12962 218 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 TLR1Q15399 786 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 LRRC36Q1X8D7 754 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 RASIP1Q5U651 963 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 CWF19L1Q69YN2 538 aaKnown RBP12.44□□□□□ -0.42
PAAF1-215ENST00000544909 TMEM207Q6UWW9 146 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 GK5Q6ZS86 529 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 ANKS3Q6ZW76 656 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 SPATA19Q7Z5L4 167 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 SPATA24Q86W54 205 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 SPATA6LQ8N4H0 392 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 SLC43A3Q8NBI5 491 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 PLD4Q96BZ4 506 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 HHIPL1Q96JK4 782 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 ZNF597Q96LX8 424 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 TBATAQ96M53 351 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 GLT1D1Q96MS3 346 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 NPAS2Q99743 824 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 MRPL9Q9BYD2 267 aaKnown RBP12.44□□□□□ -0.42
PAAF1-215ENST00000544909 CCDC68Q9H2F9 335 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 CYP4F12Q9HCS2 524 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 GID8Q9NWU2 228 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 ADA2Q9NZK5 511 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 MARCH4Q9P2E8 410 aaPredicted RBP12.44□□□□□ -0.42
PAAF1-215ENST00000544909 AP4B1Q9Y6B7 739 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 SLC12A8A0AV02 714 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 FAM155AB1AL88 458 aaPredicted RBP12.44□□□□□ -0.42
PAAF1-215ENST00000544909 UBFD1O14562 309 aaKnown RBP12.44□□□□□ -0.42
PAAF1-215ENST00000544909 TLR5O60602 858 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 TRPA1O75762 1119 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 CDK14O94921 469 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 RPS17P08708 135 aaKnown RBP12.44□□□□□ -0.42
PAAF1-215ENST00000544909 MTHFD2P13995 350 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 CR2P20023 1033 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 GPX3P22352 226 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 HOXD9P28356 352 aaPredicted RBP12.44□□□□□ -0.42
PAAF1-215ENST00000544909 TTPAP49638 278 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 ACLYP53396 1101 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 TXNL4AP83876 142 aaKnown RBP12.44□□□□□ -0.42
PAAF1-215ENST00000544909 GNA12Q03113 381 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 IHHQ14623 411 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 RTN4RL1Q86UN2 441 aaPredicted RBP12.44□□□□□ -0.42
PAAF1-215ENST00000544909 ZNF354CQ86Y25 554 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 LILRA2Q8N149 483 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 MIER2Q8N344 545 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 PHC3Q8NDX5 983 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 LINC01599Q8WXQ3 324 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 PTERQ96BW5 349 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 PHF21BQ96EK2 531 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 CDKN2AIPNLQ96HQ2 116 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 DNAJC1Q96KC8 554 aaKnown RBP12.44□□□□□ -0.42
PAAF1-215ENST00000544909 PPP1R36Q96LQ0 422 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 TRIM54Q9BYV2 358 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 SLC2A11Q9BYW1 496 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 TRIM4Q9C037 500 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 TRMT13Q9NUP7 481 aaKnown RBP12.44□□□□□ -0.42
PAAF1-215ENST00000544909 THEGQ9P2T0 379 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 DNMT3LQ9UJW3 386 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 NUDT5Q9UKK9 219 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 DNAJC15Q9Y5T4 150 aa12.44□□□□□ -0.42
PAAF1-215ENST00000544909 OAS3Q9Y6K5 1087 aaKnown RBP12.44□□□□□ -0.42
PAAF1-215ENST00000544909 GREB1Q4ZG55 1949 aa12.43□□□□□ -0.42
PAAF1-215ENST00000544909 KANSL1LA0AUZ9 987 aa12.43□□□□□ -0.42
PAAF1-215ENST00000544909 CCDC162PA2VCL2 907 aa12.43□□□□□ -0.42
PAAF1-215ENST00000544909 EIF4E1BA6NMX2 242 aaKnown RBP12.43□□□□□ -0.42
PAAF1-215ENST00000544909 GOLGA8CPA6NN73 597 aa12.43□□□□□ -0.42
PAAF1-215ENST00000544909 C2orf81A6NN90 581 aa12.43□□□□□ -0.42
PAAF1-215ENST00000544909 E7ENX8 843 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms