RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 EDEM2Q9BV94 578 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 FUT8Q9BYC5 575 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 PRSS16Q9NQE7 514 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 RAD18Q9NS91 495 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 SYBUQ9NX95 663 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.54□□□□□ -0.88
YBX3-215ENST00000544504 FETUBQ9UGM5 382 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 PPM1HQ9ULR3 514 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 TCAF1Q9Y4C2 921 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 RPS6KL1Q9Y6S9 549 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 FAM169AQ9Y6X4 670 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 MUC22E2RYF6 1773 aaPredicted RBP9.54□□□□□ -0.88
YBX3-215ENST00000544504 F5P12259 2224 aa9.54□□□□□ -0.88
YBX3-215ENST00000544504 CELSR3Q9NYQ7 3312 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 CAPN8A6NHC0 703 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 GOLGA6L10A6NI86 522 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 UPK3BL1B0FP48 263 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 UPK3BL2E5RIL1 263 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 KPNA3O00505 521 aaPredicted RBP9.53□□□□□ -0.88
YBX3-215ENST00000544504 GJB3O75712 270 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 ACSL3O95573 720 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 KLF8O95600 359 aaPredicted RBP9.53□□□□□ -0.88
YBX3-215ENST00000544504 PRLP01236 227 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 IL1BP01584 269 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 HLA-EP13747 358 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 ZNF30P17039 623 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 TPH1P17752 444 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 CSRP1P21291 193 aaKnown RBP9.53□□□□□ -0.88
YBX3-215ENST00000544504 C5AR1P21730 350 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 LPOP22079 712 aaPredicted RBP9.53□□□□□ -0.88
YBX3-215ENST00000544504 HADHAP40939 763 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 SEC13P55735 322 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 GPS2Q13227 327 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 SLC29A2Q14542 456 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 IHHQ14623 411 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 FASTKD3Q14CZ7 662 aaKnown RBP9.53□□□□□ -0.88
YBX3-215ENST00000544504 C2orf27AQ580R0 203 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 FAM182AQ5T1J6 154 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 TSTD2Q5T7W7 516 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 PDPK2PQ6A1A2 396 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 GLT6D1Q7Z4J2 308 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 IL17RCQ8NAC3 791 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.53□□□□□ -0.88
YBX3-215ENST00000544504 CALML6Q8TD86 181 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 BLOC1S5Q8TDH9 187 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 SCG3Q8WXD2 468 aaKnown RBP9.53□□□□□ -0.88
YBX3-215ENST00000544504 ZNF669Q96BR6 464 aaPredicted RBP9.53□□□□□ -0.88
YBX3-215ENST00000544504 CFAP36Q96G28 342 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 MCCC1Q96RQ3 725 aaPredicted RBP9.53□□□□□ -0.88
YBX3-215ENST00000544504 HDAC8Q9BY41 377 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 GPR63Q9BZJ6 419 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 ROPN1BQ9BZX4 212 aaPredicted RBP9.53□□□□□ -0.88
YBX3-215ENST00000544504 RSPH9Q9H1X1 276 aaPredicted RBP9.53□□□□□ -0.88
YBX3-215ENST00000544504 SMOC1Q9H4F8 434 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 ACSS3Q9H6R3 686 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 ROPN1Q9HAT0 212 aaPredicted RBP9.53□□□□□ -0.88
YBX3-215ENST00000544504 LRRC4CQ9HCJ2 640 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 C2orf42Q9NWW7 574 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 KCTD5Q9NXV2 234 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 NSMCE4AQ9NXX6 385 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 MMP17Q9ULZ9 603 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 PKP3Q9Y446 797 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 NEUROG3Q9Y4Z2 214 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 IKBKGQ9Y6K9 419 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 IGSF10Q6WRI0 2623 aa9.53□□□□□ -0.88
YBX3-215ENST00000544504 ANKRD36A6QL64 1941 aa9.52□□□□□ -0.88
YBX3-215ENST00000544504 RGSL1A5PLK6 1076 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 MROH6A6NGR9 719 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 C16orf96A6NNT2 1141 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 C4orf47A7E2U8 309 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 PFDN6O15212 129 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 STX7O15400 261 aaKnown RBP9.52□□□□□ -0.89
YBX3-215ENST00000544504 SLC7A4O43246 635 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 OPA1O60313 960 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 RNF40O75150 1001 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 TCEA3O75764 348 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 ALDH1A2O94788 518 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 TOP3BO95985 862 aaKnown RBP9.52□□□□□ -0.89
YBX3-215ENST00000544504 PDHA1P08559 390 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 PSMA3P25788 255 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 GKP32189 559 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 VIPR1P32241 457 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 NEK3P51956 506 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 PRAMEP78395 509 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 CRADDP78560 199 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 MGAT5Q09328 741 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 OLIG2Q13516 323 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 ARHGEF7Q14155 803 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 CRYMQ14894 314 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 CST6Q15828 149 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 UGP2Q16851 508 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 LONRF1Q17RB8 773 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 TTC31Q49AM3 519 aaPredicted RBP9.52□□□□□ -0.89
YBX3-215ENST00000544504 ANKRD20A4Q4UJ75 823 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 HP1BP3Q5SSJ5 553 aaPredicted RBP9.52□□□□□ -0.89
YBX3-215ENST00000544504 EMC10Q5UCC4 262 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 KIAA0930Q6ICG6 404 aaPredicted RBP9.52□□□□□ -0.89
YBX3-215ENST00000544504 TCEAL6Q6IPX3 200 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 FBXL19Q6PCT2 694 aa9.52□□□□□ -0.89
YBX3-215ENST00000544504 UNC5AQ6ZN44 842 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms