RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 MEOX2P50222 304 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 ANTXR2P58335 489 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 SPCS3P61009 180 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 MAT1AQ00266 395 aaKnown RBP8.9□□□□□ -0.98
VPS13D-212ENST00000543766 GIT2Q14161 759 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 CHRNA2Q15822 529 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 KRT40Q6A162 431 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 SPRED1Q7Z699 444 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 THNSL2Q86YJ6 484 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 OR10H4Q8NGA5 316 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 OR2W6PQ8NHA6 318 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 PSPC1Q8WXF1 523 aaKnown RBP8.9□□□□□ -0.98
VPS13D-212ENST00000543766 CSRNP1Q96S65 589 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 HTATIP2Q9BUP3 242 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 NEUROG2Q9H2A3 272 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 EPB41L4BQ9H329 900 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 STRN4Q9NRL3 753 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 GDAQ9Y2T3 454 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 KIAA1217Q5T5P2 1943 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 PQBP1O60828 265 aaKnown RBP8.9□□□□□ -0.99
VPS13D-212ENST00000543766 PDE8BO95263 885 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 IL1AP01583 271 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 SLC2A1P11166 492 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 PSKH1P11801 424 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 DARSP14868 501 aaKnown RBP8.9□□□□□ -0.99
VPS13D-212ENST00000543766 PTPN6P29350 595 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 MAGEA4P43358 317 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 MAP2K4P45985 399 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 CCT3P49368 545 aaKnown RBP8.9□□□□□ -0.99
VPS13D-212ENST00000543766 MGAT5Q09328 741 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 LTB4RQ15722 352 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 TMEM44Q2T9K0 475 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 PRAMEF20Q5VT98 475 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 KIAA1324Q6UXG2 1013 aaKnown RBP8.9□□□□□ -0.99
VPS13D-212ENST00000543766 TUSC5Q8IXB3 177 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 TCEAL8Q8IYN2 117 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 GRPEL2Q8TAA5 225 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 TBC1D16Q8TBP0 767 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 BSCL2Q96G97 398 aaPredicted RBP8.9□□□□□ -0.99
VPS13D-212ENST00000543766 SHDQ96IW2 340 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 PAPOLGQ9BWT3 736 aaKnown RBP8.9□□□□□ -0.99
VPS13D-212ENST00000543766 OSBPL8Q9BZF1 889 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 SLC22A4Q9H015 551 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 CFAP97Q9P2B7 532 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.9□□□□□ -0.99
VPS13D-212ENST00000543766 COPS3Q9UNS2 423 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 BOLA1Q9Y3E2 137 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 MEGF6O75095 1541 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 MYH4Q9Y623 1939 aa8.9□□□□□ -0.99
VPS13D-212ENST00000543766 TNKSO95271 1327 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 A0A1W2PQJ5 194 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 PGPEP1LA6NFU8 196 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 URADA6NGE7 173 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 NDUFA2O43678 99 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 AKAP8O43823 692 aaKnown RBP8.89□□□□□ -0.99
VPS13D-212ENST00000543766 AGTP01019 485 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 ITIH2P19823 946 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 CALML3P27482 149 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 MAGOHP61326 146 aaKnown RBP8.89□□□□□ -0.99
VPS13D-212ENST00000543766 IFITM2Q01629 132 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 RFX4Q33E94 735 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 BRMS1LQ5PSV4 323 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 KCNT2Q6UVM3 1135 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 IZUMO2Q6UXV1 221 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 TRILQ7L0X0 811 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 ADAMTSL2Q86TH1 951 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 TRMT10AQ8TBZ6 339 aaKnown RBP8.89□□□□□ -0.99
VPS13D-212ENST00000543766 PCNPQ8WW12 178 aaKnown RBP8.89□□□□□ -0.99
VPS13D-212ENST00000543766 MAFIPQ8WZ33 124 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 MAGOHBQ96A72 148 aaKnown RBP8.89□□□□□ -0.99
VPS13D-212ENST00000543766 ZNF578Q96N58 590 aaPredicted RBP8.89□□□□□ -0.99
VPS13D-212ENST00000543766 TXN2Q99757 166 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 CNNM1Q9NRU3 951 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 ADPRHL2Q9NX46 363 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 CNOT6Q9ULM6 557 aaKnown RBP8.89□□□□□ -0.99
VPS13D-212ENST00000543766 ZNF831Q5JPB2 1677 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 SOS2Q07890 1332 aaPredicted RBP8.89□□□□□ -0.99
VPS13D-212ENST00000543766 EDDM13A0A1B0GTR0 161 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 GNG14A0A1W2PPG7 69 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 ALG1L2C9J202 215 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 SMLR1H3BR10 107 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 TMX2-CTNND1H3BSU7 103 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 O00370 1275 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 CES2O00748 559 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 ALOX15BO15296 676 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 DFNA5O60443 496 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 CYC1P08574 325 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 PIM1P11309 404 aaPredicted RBP8.89□□□□□ -0.99
VPS13D-212ENST00000543766 FGFR1P11362 822 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 CKMT1AP12532 417 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 UBE2G2P60604 165 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 FASTKD3Q14CZ7 662 aaKnown RBP8.89□□□□□ -0.99
VPS13D-212ENST00000543766 RNF151Q2KHN1 245 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 HYAL4Q2M3T9 481 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 FAM47AQ5JRC9 791 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 RALGPS1Q5JS13 557 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 PDSS1Q5T2R2 415 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 UBE2R2Q712K3 238 aaPredicted RBP8.89□□□□□ -0.99
VPS13D-212ENST00000543766 GSTA5Q7RTV2 222 aa8.89□□□□□ -0.99
VPS13D-212ENST00000543766 TMCO2Q7Z6W1 182 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms