RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CFAP161Q6P656 301 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 BHLHB9Q6PI77 547 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 CERS6Q6ZMG9 384 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 CELF5Q8N6W0 485 aaKnown RBP6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 LINGO1Q96FE5 620 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 KCTD14Q9BQ13 255 aaPredicted RBP6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 ELAC1Q9H777 363 aaKnown RBP6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 SYBUQ9NX95 663 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 PCYOX1Q9UHG3 505 aa6.9□□□□□ -1.3
SRGAP1-206ENST00000543397 C10orf71Q711Q0 1435 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 SNED1Q8TER0 1413 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 SHPRHQ149N8 1683 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 TRBV23OR9-2A0A075B6M9 112 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 PIPSLA2A3N6 862 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 C9IYK1 514 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 ALG1L2C9J202 215 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 BHMG1C9JSJ3 638 aaPredicted RBP6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 ATP6V1B2P21281 511 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 SLC11A1P49279 550 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 NOMO1Q15155 1222 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 SOWAHAQ2M3V2 549 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 DEPDC1Q5TB30 811 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 CREG2Q8IUH2 290 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 RTL3Q8N8U3 475 aaKnown RBP6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 ATG16L2Q8NAA4 619 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 SCAMP5Q8TAC9 235 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 IRF7Q92985 503 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 CLP1Q92989 425 aaKnown RBP6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 MRPL48Q96GC5 212 aaKnown RBP6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 ARHGAP39Q9C0H5 1083 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 NMUR1Q9HB89 426 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 RPRD1BQ9NQG5 326 aaKnown RBP6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 RABGEF1Q9UJ41 708 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 COLEC10Q9Y6Z7 277 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 LRRC37A3O60309 1634 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 NID2Q14112 1375 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 FFAR3O14843 346 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 FSCN2O14926 492 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 INPPL1O15357 1258 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 GPR42O15529 346 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 UMPSP11172 480 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 RPL3P39023 403 aaKnown RBP6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 GBE1Q04446 702 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 FAM187BQ17R55 369 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 RAB12Q6IQ22 244 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 RIPOR1Q6ZS17 1223 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 GALNTL5Q7Z4T8 443 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 CIR1Q86X95 450 aaPredicted RBP6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 NRSN1Q8IZ57 195 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 POMGNT2Q8NAT1 580 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 OR52K2Q8NGK3 314 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 BPIFB1Q8TDL5 484 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 TRPC4APQ8TEL6 797 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 ACDQ96AP0 544 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 NSMCE2Q96MF7 247 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 MINDY3Q9H8M7 445 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 CACNG4Q9UBN1 327 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 FCF1Q9Y324 198 aaKnown RBP6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 PCDHB1Q9Y5F3 818 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 PCDHGC4Q9Y5F7 938 aa6.9□□□□□ -1.31
SRGAP1-206ENST00000543397 COL1A1P02452 1464 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 AHDC1Q5TGY3 1603 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 C15orf38-AP3S2A0A0A6YYH1 394 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 SH3D21A4FU49 640 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 DHX15O43143 795 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 ERAL1O75616 437 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 WDR47O94967 919 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 OTCP00480 354 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 SERPINB10P48595 397 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 DHPSP49366 369 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 CLCN2P51788 898 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 NDST2P52849 883 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 TRAF2Q12933 501 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 BIKQ13323 160 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 CAPN13Q6MZZ7 669 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 C16orf46Q6P387 395 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 RHBDF2Q6PJF5 856 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 AGMOQ6ZNB7 445 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 ZCCHC23Q6ZST2 131 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 PLEKHM3Q6ZWE6 761 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 UBE2R2Q712K3 238 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 ARPINQ7Z6K5 226 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 PRELID2Q8N945 189 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 TFAP2BQ92481 460 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 SIPA1Q96FS4 1042 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 KCTD15Q96SI1 283 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 OSBPL6Q9BZF3 934 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 ABCG8Q9H221 673 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 RPP40O75818 363 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 PIGRP01833 764 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 TSHRP16473 764 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 GJA1P17302 382 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 LBPP18428 481 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 MTHFRP42898 656 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 CSNK2BP67870 215 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 LPIN1Q14693 890 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 DLG2Q15700 870 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 CPSF6Q16630 551 aaKnown RBP eCLIP6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 TXNDC8Q6A555 127 aa6.89□□□□□ -1.31
SRGAP1-206ENST00000543397 C1orf94Q6P1W5 598 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms