RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 TRABDQ9H4I3 376 aa18.37■□□□□ 0.53
COPS7A-216ENST00000543170 ZFYVE1Q9HBF4 777 aa18.37■□□□□ 0.53
COPS7A-216ENST00000543170 PKD2L2Q9NZM6 624 aa18.37■□□□□ 0.53
COPS7A-216ENST00000543170 NFKBIL1Q9UBC1 381 aaPredicted RBP18.37■□□□□ 0.53
COPS7A-216ENST00000543170 SNX12Q9UMY4 172 aa18.37■□□□□ 0.53
COPS7A-216ENST00000543170 ZNF711Q9Y462 761 aa18.37■□□□□ 0.53
COPS7A-216ENST00000543170 COL5A1P20908 1838 aaPredicted RBP18.37■□□□□ 0.53
COPS7A-216ENST00000543170 F5H423 210 aaPredicted RBP18.36■□□□□ 0.53
COPS7A-216ENST00000543170 NME1P15531 152 aaKnown RBP18.36■□□□□ 0.53
COPS7A-216ENST00000543170 HTR1BP28222 390 aa18.36■□□□□ 0.53
COPS7A-216ENST00000543170 ADRA1AP35348 466 aa18.36■□□□□ 0.53
COPS7A-216ENST00000543170 SIRPB2Q5JXA9 342 aa18.36■□□□□ 0.53
COPS7A-216ENST00000543170 TPRG1LQ5T0D9 272 aa18.36■□□□□ 0.53
COPS7A-216ENST00000543170 KDM7AQ6ZMT4 941 aa18.36■□□□□ 0.53
COPS7A-216ENST00000543170 LYSMD3Q7Z3D4 306 aa18.36■□□□□ 0.53
COPS7A-216ENST00000543170 NAXDQ8IW45 347 aa18.36■□□□□ 0.53
COPS7A-216ENST00000543170 PLA2G15Q8NCC3 412 aa18.36■□□□□ 0.53
COPS7A-216ENST00000543170 ATL2Q8NHH9 583 aa18.36■□□□□ 0.53
COPS7A-216ENST00000543170 SAP25Q8TEE9 199 aa18.36■□□□□ 0.53
COPS7A-216ENST00000543170 TBATAQ96M53 351 aa18.36■□□□□ 0.53
COPS7A-216ENST00000543170 CDH19Q9H159 772 aa18.36■□□□□ 0.53
COPS7A-216ENST00000543170 WDR26Q9H7D7 661 aa18.36■□□□□ 0.53
COPS7A-216ENST00000543170 HACD3Q9P035 362 aa18.36■□□□□ 0.53
COPS7A-216ENST00000543170 ZNF148Q9UQR1 794 aa18.36■□□□□ 0.53
COPS7A-216ENST00000543170 DRG1Q9Y295 367 aaKnown RBP18.36■□□□□ 0.53
COPS7A-216ENST00000543170 CNOT1A5YKK6 2376 aaKnown RBP18.35■□□□□ 0.53
COPS7A-216ENST00000543170 A0A0U1RQS6 177 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 H3BM21 787 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 PGRMC1O00264 195 aaKnown RBP18.35■□□□□ 0.53
COPS7A-216ENST00000543170 CSF2P04141 144 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 TCP1P17987 556 aaKnown RBP18.35■□□□□ 0.53
COPS7A-216ENST00000543170 ACTN2P35609 894 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 GRK6P43250 576 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 SPINT3P49223 89 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 DCDC1P59894 354 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 HNRNPKP61978 463 aaKnown RBP eCLIP18.35■□□□□ 0.53
COPS7A-216ENST00000543170 KCTD11Q693B1 232 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 RANBP10Q6VN20 620 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 KANSL1Q7Z3B3 1105 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 TMC3Q7Z5M5 1100 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 ACTRT1Q8TDG2 376 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 FICDQ9BVA6 458 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 TEX101Q9BY14 249 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 ABCG8Q9H221 673 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 SLC32A1Q9H598 525 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 RAD18Q9NS91 495 aa18.35■□□□□ 0.53
COPS7A-216ENST00000543170 FEZ2Q9UHY8 353 aaPredicted RBP18.35■□□□□ 0.53
COPS7A-216ENST00000543170 CACNB4O00305 520 aaPredicted RBP18.34■□□□□ 0.53
COPS7A-216ENST00000543170 PDE2AO00408 941 aaPredicted RBP18.34■□□□□ 0.53
COPS7A-216ENST00000543170 METTL18O95568 372 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 SOD1P00441 154 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 MYCLP1P12525 358 aaPredicted RBP18.34■□□□□ 0.53
COPS7A-216ENST00000543170 KELP23276 732 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 CHRNA4P43681 627 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 GNG11P61952 73 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 IL9RQ01113 521 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 EIF2B5Q13144 721 aaKnown RBP18.34■□□□□ 0.53
COPS7A-216ENST00000543170 SNX1Q13596 522 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 PRAMEF14Q5SWL7 426 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 HENMT1Q5T8I9 393 aaKnown RBP18.34■□□□□ 0.53
COPS7A-216ENST00000543170 RAET1GQ6H3X3 334 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 PELI3Q8N2H9 469 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 PRELID2Q8N945 189 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 CCDC89Q8N998 374 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 BAHD1Q8TBE0 780 aaPredicted RBP18.34■□□□□ 0.53
COPS7A-216ENST00000543170 BTN2A2Q8WVV5 523 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 FUBP1Q96AE4 644 aaKnown RBP18.34■□□□□ 0.53
COPS7A-216ENST00000543170 AP2M1Q96CW1 435 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 EID2BQ96D98 161 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 LRRC40Q9H9A6 602 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 ARNT2Q9HBZ2 717 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 PHPT1Q9NRX4 125 aaPredicted RBP18.34■□□□□ 0.53
COPS7A-216ENST00000543170 PCOLCE2Q9UKZ9 415 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 OR1A2Q9Y585 309 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 PCNX2A6NKB5 2137 aa18.34■□□□□ 0.53
COPS7A-216ENST00000543170 ZNF106Q9H2Y7 1883 aaKnown RBP18.33■□□□□ 0.53
COPS7A-216ENST00000543170 ERI2A8K979 691 aaKnown RBP18.33■□□□□ 0.52
COPS7A-216ENST00000543170 K7ESM1 405 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 PSMD3O43242 534 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 CBFA2T3O75081 653 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 PIAS2O75928 621 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 IFNB1P01574 187 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 PIRTP0C851 137 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 CEACAM1P13688 526 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 HMGCLP35914 325 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 FDFT1P37268 417 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 BLKP51451 505 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 CDK3Q00526 305 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 CYP1B1Q16678 543 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 PAPD7Q5XG87 772 aaKnown RBP18.33■□□□□ 0.52
COPS7A-216ENST00000543170 ADAMTSL4Q6UY14 1074 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 C4orf22Q6V702 233 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 HEATR4Q86WZ0 1026 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 SLC25A41Q8N5S1 370 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 COG1Q8WTW3 980 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 WDR92Q96MX6 357 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 WDR24Q96S15 920 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 TBL1YQ9BQ87 522 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 GPR63Q9BZJ6 419 aa18.33■□□□□ 0.52
COPS7A-216ENST00000543170 DNAJC28Q9NX36 388 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms