RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 GOLGA6L10A6NI86 522 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 CXorf49A8MYA2 514 aaPredicted RBP10.66□□□□□ -0.7
DDB1-221ENST00000543162 GOLGA8KD6RF30 607 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 GOLGA8TH3BQL2 631 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 AREL1O15033 823 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 SPINT1O43278 529 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 OPA1O60313 960 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 GOT2P00505 430 aaKnown RBP10.66□□□□□ -0.7
DDB1-221ENST00000543162 C1QAP02745 245 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 INHBAP08476 426 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 ELFN1P0C7U0 828 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 MYZAPP0CAP1 466 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 ACADMP11310 421 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 MSH2P43246 934 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 SLCO1A2P46721 670 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 PTSQ03393 145 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 RALGDSQ12967 914 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 FZD5Q13467 585 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 TJAP1Q5JTD0 557 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 PIP5KL1Q5T9C9 394 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 TEDDM1Q5T9Z0 273 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 AGBL4Q5VU57 503 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 AFTPHQ6ULP2 937 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 KIAA1324Q6UXG2 1013 aaKnown RBP10.66□□□□□ -0.7
DDB1-221ENST00000543162 MARK2Q7KZI7 788 aaKnown RBP10.66□□□□□ -0.7
DDB1-221ENST00000543162 PTAR1Q7Z6K3 402 aaPredicted RBP10.66□□□□□ -0.7
DDB1-221ENST00000543162 OTUD6BQ8N6M0 293 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 GOLGA6L1Q8N7Z2 621 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 PJA1Q8NG27 643 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 MRGPRX1Q96LB2 322 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 PAFAH2Q99487 392 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 WRAP53Q9BUR4 548 aaKnown RBP10.66□□□□□ -0.7
DDB1-221ENST00000543162 MFSD1Q9H3U5 465 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 SUDS3Q9H7L9 328 aaPredicted RBP10.66□□□□□ -0.7
DDB1-221ENST00000543162 SMYD2Q9NRG4 433 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 RAD18Q9NS91 495 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 IARS2Q9NSE4 1012 aaKnown RBP10.66□□□□□ -0.7
DDB1-221ENST00000543162 NSMCE4AQ9NXX6 385 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 PKD2L2Q9NZM6 624 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 TXNDC16Q9P2K2 825 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 GGT7Q9UJ14 662 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 NCKAP1Q9Y2A7 1128 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 FNDC3AQ9Y2H6 1198 aaKnown RBP10.66□□□□□ -0.7
DDB1-221ENST00000543162 FADS3Q9Y5Q0 445 aa10.66□□□□□ -0.7
DDB1-221ENST00000543162 OR51F1A6NGY5 319 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 GOLGA8CPA6NN73 597 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 H0Y858 1186 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 H7C0S8 307 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 AGPSO00116 658 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 PSMD11O00231 422 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 TSPAN6O43657 245 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 AP1G1O43747 822 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 CDH16O75309 829 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 C1SP09871 688 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 C7P10643 843 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 BPIP17213 487 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 GABRG2P18507 467 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 NDUFV2P19404 249 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 MC4RP32245 332 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 SPAM1P38567 509 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 SPINT3P49223 89 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 LIG3P49916 1009 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 PTPN5P54829 565 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 GPS2Q13227 327 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 GAS6Q14393 721 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 ACOX1Q15067 660 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 TMEM52BQ4KMG9 183 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 FASTKD1Q53R41 847 aaKnown RBP10.65□□□□□ -0.7
DDB1-221ENST00000543162 ZDHHC20Q5W0Z9 365 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 ZNF470Q6ECI4 717 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 MRNIPQ6NTE8 343 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 LIPIQ6XZB0 460 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 HSD11B1LQ7Z5J1 315 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 SLC26A11Q86WA9 606 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 TDRPQ86YL5 185 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 LMNTD2Q8IXW0 634 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 PGBD3Q8N328 593 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 CBARPQ8N350 705 aaPredicted RBP10.65□□□□□ -0.7
DDB1-221ENST00000543162 RIBC1Q8N443 379 aaPredicted RBP10.65□□□□□ -0.7
DDB1-221ENST00000543162 OR4L1Q8NH43 312 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 CXorf40AQ8TE69 158 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 HMGB4Q8WW32 186 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 SLC44A1Q8WWI5 657 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 CLDN23Q96B33 292 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 AGAP2Q99490 1192 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 CPNE1Q99829 537 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 CENPHQ9H3R5 247 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 IL26Q9NPH9 171 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 CATSPERZQ9NTU4 200 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 BCCIPQ9P287 314 aaKnown RBP eCLIP10.65□□□□□ -0.7
DDB1-221ENST00000543162 SLC17A6Q9P2U8 582 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 PSMC3IPQ9P2W1 217 aaPredicted RBP10.65□□□□□ -0.7
DDB1-221ENST00000543162 SERGEFQ9UGK8 458 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 APPL1Q9UKG1 709 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 SIT1Q9Y3P8 196 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 SLC30A1Q9Y6M5 507 aa10.65□□□□□ -0.7
DDB1-221ENST00000543162 GLYATL1P3A0A0U1RQE8 302 aa10.64□□□□□ -0.71
DDB1-221ENST00000543162 RGSL1A5PLK6 1076 aa10.64□□□□□ -0.71
DDB1-221ENST00000543162 WNT9AO14904 365 aa10.64□□□□□ -0.71
DDB1-221ENST00000543162 CD3EAPO15446 510 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms