RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	ACOX3	O15254	700 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	INPP4B	O15327	924 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	CDK14	O94921	469 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	RASAL1	O95294	804 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	TFPT	P0C1Z6	253 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	MTHFD1	P11586	935 aa	Known RBP	12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	HOXD8	P13378	290 aa	Predicted RBP	12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	GFAP	P14136	432 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	SERPINH1	P50454	418 aa	Known RBP	12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	ITK	Q08881	620 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	TMEM26	Q6ZUK4	368 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	PTGR2	Q8N8N7	351 aa	Predicted RBP	12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	TRPV3	Q8NET8	790 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	PTER	Q96BW5	349 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	LRRC58	Q96CX6	371 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	CLEC11A	Q9Y240	323 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838		A0A1W2PPW3	197 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	PAGE1	O75459	146 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	SIX3	O95343	332 aa	Predicted RBP	12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	TTK	P33981	857 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	SOX11	P35716	441 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	FOXA1	P55317	472 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	GPC2	Q8N158	579 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	TMEM86A	Q8N2M4	240 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	GOLM1	Q8NBJ4	401 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	OR13J1	Q8NGT2	312 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	ZNF420	Q8TAQ5	688 aa	Predicted RBP	12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	SH3RF2	Q8TEC5	729 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	TUBGCP3	Q96CW5	907 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	CD320	Q9NPF0	282 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	CDH9	Q9ULB4	789 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	CRYL1	Q9Y2S2	319 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	LRRC14B	A6NHZ5	514 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	AZIN1	O14977	448 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	FGF10	O15520	208 aa	Predicted RBP	12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	ATP6V1G1	O75348	118 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	VARS	P26640	1264 aa	Known RBP	12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	CAPG	P40121	348 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	NAA20	P61599	178 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	AARS2	Q5JTZ9	985 aa	Known RBP	12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	KDELC1	Q6UW63	502 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	KCTD8	Q6ZWB6	473 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	ANKRD23	Q86SG2	305 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	GPRC5A	Q8NFJ5	357 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	MYLPF	Q96A32	169 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	MPP6	Q9NZW5	540 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	SH3GLB1	Q9Y371	365 aa		12.92	□□□□□ -0.34
DDX11-223	ENST00000542838	PLXNB2	O15031	1838 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	TRIP12	Q14669	1992 aa	Predicted RBP	12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	TTC24	A2A3L6	582 aa	Predicted RBP	12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	OR51F1	A6NGY5	319 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	GPI	P06744	558 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	BDNF	P23560	247 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	DCK	P27707	260 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	RAB44	Q7Z6P3	723 aa	Predicted RBP	12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	DNAJB14	Q8TBM8	379 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	MAGEE2	Q8TD90	523 aa	Predicted RBP	12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	BORCS5	Q969J3	196 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	RPL10L	Q96L21	214 aa	Known RBP	12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	FCRL2	Q96LA5	508 aa	Predicted RBP	12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	KCNA7	Q96RP8	456 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	NAA50	Q9GZZ1	169 aa	Known RBP	12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	SOX17	Q9H6I2	414 aa	Predicted RBP	12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	NT5M	Q9NPB1	228 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	RGS18	Q9NS28	235 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	SMPD3	Q9NY59	655 aa	Predicted RBP	12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	BTRC	Q9Y297	605 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	MEIS3P2	A8K0S8	358 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	IRAK2	O43187	625 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	SNAP91	O60641	907 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	S1PR4	O95977	384 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	MYL3	P08590	195 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	LINC00032	P0C843	101 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	FCGR1A	P12314	374 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	HGF	P14210	728 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	NCK1	P16333	377 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	LBP	P18428	481 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	CLCNKB	P51801	687 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	MAX	P61244	160 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	NFKB2	Q00653	900 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	FGD3	Q5JSP0	725 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	DEFB132	Q7Z7B7	95 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	PHYKPL	Q8IUZ5	450 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	ASB2	Q96Q27	587 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	DOK1	Q99704	481 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	SLC25A51	Q9H1U9	297 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	ARNT2	Q9HBZ2	717 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	PKD2L2	Q9NZM6	624 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	MARCH4	Q9P2E8	410 aa	Predicted RBP	12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	PCDHA9	Q9Y5H5	950 aa		12.91	□□□□□ -0.34
DDX11-223	ENST00000542838	MBLAC1	A4D2B0	266 aa	Predicted RBP	12.9	□□□□□ -0.34
DDX11-223	ENST00000542838	BOLA2-SMG1P6	H3BVE0	249 aa		12.9	□□□□□ -0.34
DDX11-223	ENST00000542838	UBXN8	O00124	270 aa		12.9	□□□□□ -0.34
DDX11-223	ENST00000542838	DYNC1LI2	O43237	492 aa	Predicted RBP	12.9	□□□□□ -0.34
DDX11-223	ENST00000542838	MSI1	O43347	362 aa	Known RBP	12.9	□□□□□ -0.34
DDX11-223	ENST00000542838	WISP3	O95389	354 aa	Predicted RBP	12.9	□□□□□ -0.34
DDX11-223	ENST00000542838	MOCS2	O96007	188 aa	Predicted RBP	12.9	□□□□□ -0.34
DDX11-223	ENST00000542838	FGF4	P08620	206 aa		12.9	□□□□□ -0.34
DDX11-223	ENST00000542838	C7	P10643	843 aa		12.9	□□□□□ -0.34
DDX11-223	ENST00000542838	CD1D	P15813	335 aa		12.9	□□□□□ -0.34

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