RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 RGL4Q8IZJ4 473 aa17.1■□□□□ 0.33
LIG1-204ENST00000542460 C19orf43Q9BQ61 176 aa17.1■□□□□ 0.33
LIG1-204ENST00000542460 ORAI3Q9BRQ5 295 aa17.1■□□□□ 0.33
LIG1-204ENST00000542460 CDH19Q9H159 772 aa17.1■□□□□ 0.33
LIG1-204ENST00000542460 EPB41L5Q9HCM4 733 aa17.1■□□□□ 0.33
LIG1-204ENST00000542460 FAM114A2Q9NRY5 505 aa17.1■□□□□ 0.33
LIG1-204ENST00000542460 IL17CQ9P0M4 197 aa17.1■□□□□ 0.33
LIG1-204ENST00000542460 RAB23Q9ULC3 237 aa17.1■□□□□ 0.33
LIG1-204ENST00000542460 SDR42E2A6NKP2 422 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 GOLGA8CPA6NN73 597 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 BHMG1C9JSJ3 638 aaPredicted RBP17.09■□□□□ 0.33
LIG1-204ENST00000542460 STX7O15400 261 aaKnown RBP17.09■□□□□ 0.33
LIG1-204ENST00000542460 MGAT1P26572 445 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 MAOBP27338 520 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 AKT2P31751 481 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 MTM1Q13496 603 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 TRADDQ15628 312 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 ARMC3Q5W041 872 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 ZDHHC20Q5W0Z9 365 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 ZNF765Q7L2R6 523 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 NLRP9Q7RTR0 991 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 NLRP8Q86W28 1048 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 PDIK1LQ8N165 341 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 DENND6BQ8NEG7 585 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 PPHLN1Q8NEY8 458 aaKnown RBP17.09■□□□□ 0.33
LIG1-204ENST00000542460 ART4Q93070 314 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 CENPTQ96BT3 561 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 NUS1Q96E22 293 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 LOXL4Q96JB6 756 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 SERAC1Q96JX3 654 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 KLF6Q99612 283 aaPredicted RBP17.09■□□□□ 0.33
LIG1-204ENST00000542460 SEMA4AQ9H3S1 761 aa17.09■□□□□ 0.33
LIG1-204ENST00000542460 ESYT3A0FGR9 886 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 MAGEB16A2A368 324 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 MROH6A6NGR9 719 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 BUD23O43709 281 aaKnown RBP17.08■□□□□ 0.32
LIG1-204ENST00000542460 RHOXF2BP0C7M4 288 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 ITPKAP23677 461 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 DPP6P42658 865 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 PLTPP55058 493 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 DPTQ07507 201 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 WSCD2Q2TBF2 565 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 CCDC38Q502W7 563 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 TEX35Q5T0J7 233 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 RFLNAQ6ZTI6 216 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 TP53I13Q8NBR0 393 aaPredicted RBP17.08■□□□□ 0.32
LIG1-204ENST00000542460 OR4K2Q8NGD2 314 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 PTCD2Q8WV60 388 aaKnown RBP17.08■□□□□ 0.32
LIG1-204ENST00000542460 RHOXF2Q9BQY4 288 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 MIR1-1HGQ9H1L0 117 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 ABCG8Q9H221 673 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 FAM83DQ9H4H8 585 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 BPIFA1Q9NP55 256 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 SYBUQ9NX95 663 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 CD84Q9UIB8 345 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 RIMKLBQ9ULI2 386 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 TCAF1Q9Y4C2 921 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 KCTD3Q9Y597 815 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 HS3ST3A1Q9Y663 406 aa17.08■□□□□ 0.32
LIG1-204ENST00000542460 FPGTO14772 594 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 RAD51BO15315 384 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 BPIP17213 487 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 HADHAP40939 763 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 ZNF140P52738 457 aaPredicted RBP17.07■□□□□ 0.32
LIG1-204ENST00000542460 ARL4CP56559 192 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 DCDC1P59894 354 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 RACK1P63244 317 aaKnown RBP17.07■□□□□ 0.32
LIG1-204ENST00000542460 CRADDP78560 199 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 STAT4Q14765 748 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 LPAL2Q16609 132 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 HIF1AQ16665 826 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 SKIDA1Q1XH10 827 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 DNAJC21Q5F1R6 531 aaKnown RBP17.07■□□□□ 0.32
LIG1-204ENST00000542460 FNBP1LQ5T0N5 605 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 ZCCHC9Q8N567 271 aaKnown RBP17.07■□□□□ 0.32
LIG1-204ENST00000542460 TMEM145Q8NBT3 493 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 GPR26Q8NDV2 337 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 C1orf216Q8TAB5 229 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 STYXQ8WUJ0 223 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 PEX13Q92968 403 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 SCAMP4Q969E2 229 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 AP2M1Q96CW1 435 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 SIGLEC10Q96LC7 697 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 PLEKHG4BQ96PX9 1271 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 KIFC1Q9BW19 673 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 FAM129AQ9BZQ8 928 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 FZD3Q9NPG1 666 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 MBNL1Q9NR56 388 aaKnown RBP17.07■□□□□ 0.32
LIG1-204ENST00000542460 CHRAC1Q9NRG0 131 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 NLE1Q9NVX2 485 aaPredicted RBP17.07■□□□□ 0.32
LIG1-204ENST00000542460 SAMD15Q9P1V8 674 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 NFKBIL1Q9UBC1 381 aaPredicted RBP17.07■□□□□ 0.32
LIG1-204ENST00000542460 PILRBQ9UKJ0 227 aa17.07■□□□□ 0.32
LIG1-204ENST00000542460 GNSP15586 552 aa17.06■□□□□ 0.32
LIG1-204ENST00000542460 NBL1P41271 181 aa17.06■□□□□ 0.32
LIG1-204ENST00000542460 PTPRCAPQ14761 206 aa17.06■□□□□ 0.32
LIG1-204ENST00000542460 IRF4Q15306 451 aa17.06■□□□□ 0.32
LIG1-204ENST00000542460 TSTD2Q5T7W7 516 aa17.06■□□□□ 0.32
LIG1-204ENST00000542460 ESRP1Q6NXG1 681 aaKnown RBP17.06■□□□□ 0.32
LIG1-204ENST00000542460 CASC4Q6P4E1 433 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms