RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SLC25A13Q9UJS0 675 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 DCTN4Q9UJW0 460 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 TLK1Q9UKI8 766 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 ANKRD6Q9Y2G4 727 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 ARL2BPQ9Y2Y0 163 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 ACOT9Q9Y305 439 aa12.26□□□□□ -0.45
AP003559.1-201ENST00000540906 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 GOLGA8CPA6NN73 597 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 STX7O15400 261 aaKnown RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 SOCS5O75159 536 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 UGT2B4P06133 528 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 CPA3P15088 417 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 OGNP20774 298 aaKnown RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 LAMB3Q13751 1172 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 RNF187Q5TA31 235 aaPredicted RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 LRRC8EQ6NSJ5 796 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 ANKRD54Q6NXT1 300 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 AFTPHQ6ULP2 937 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 VITQ6UXI7 678 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 FSTL5Q8N475 847 aaPredicted RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 BPIFB1Q8TDL5 484 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 LPGAT1Q92604 370 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 ISG20Q96AZ6 181 aaKnown RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 ECHDC3Q96DC8 303 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 SORT1Q99523 831 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 ATP13A3Q9H7F0 1226 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 MAGEE1Q9HCI5 957 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 GALPQ9UBC7 116 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 MARCOQ9UEW3 520 aaPredicted RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 VWA7Q9Y334 891 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 ZNF106Q9H2Y7 1883 aaKnown RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 MUC22E2RYF6 1773 aaPredicted RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 TRIOBPQ9H2D6 2365 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 CAPN8A6NHC0 703 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 PRRT4C9JH25 899 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 SLC9A3R1O14745 358 aaPredicted RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 HOXC11O43248 304 aaPredicted RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 TULP3O75386 442 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 KLHL2O95198 593 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 CTSLP07711 333 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 FDXRP22570 491 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 LHCGRP22888 699 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 SNRPD1P62314 119 aaKnown RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 STX3Q13277 289 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 CSHL1Q14406 222 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 CCDC153Q494R4 210 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 TAF1BQ53T94 588 aaPredicted RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 FAM219BQ5XKK7 198 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 AHI1Q8N157 1196 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 FITM2Q8N6M3 262 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 PCDH20Q8N6Y1 951 aaKnown RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 GRIN3AQ8TCU5 1115 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 TIFAQ96CG3 184 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 SGF29Q96ES7 293 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 PRR11Q96HE9 360 aaPredicted RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 MYADMQ96S97 322 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 SLC30A3Q99726 388 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 FAM83CQ9BQN1 747 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 AARSD1Q9BTE6 412 aaKnown RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 GPR63Q9BZJ6 419 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 SUV39H2Q9H5I1 410 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 DZANK1Q9NVP4 752 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 KLHL14Q9P2G3 628 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 XPR1Q9UBH6 696 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 ZMYM5Q9UJ78 669 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 IKZF3Q9UKT9 509 aa12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 RRP15Q9Y3B9 282 aaKnown RBP12.25□□□□□ -0.45
AP003559.1-201ENST00000540906 C1orf232A0A0U1RR37 186 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 NEMP2A6NFY4 417 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 IL1BP01584 269 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 KITP10721 976 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 POLR2EP19388 210 aaKnown RBP12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 KCNA5P22460 613 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 CRABP2P29373 138 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 SERPINA4P29622 427 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 FMO4P31512 558 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 KCNC1P48547 511 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 POLD2P49005 469 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 DGKGP49619 791 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 KDSRQ06136 332 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 GRM2Q14416 872 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 DMC1Q14565 340 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 GLIPR1L2Q4G1C9 344 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 ZRANB3Q5FWF4 1079 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 CTSL3PQ5NE16 218 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 MRNIPQ6NTE8 343 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 CRTC1Q6UUV9 634 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 FAM151BQ6UXP7 276 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 TRPM8Q7Z2W7 1104 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 LMNTD2Q8IXW0 634 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 GRAMD1AQ96CP6 724 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 CHFRQ96EP1 664 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 SCYL1Q96KG9 808 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 BIRC8Q96P09 236 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 CDCA3Q99618 268 aaPredicted RBP12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 CIPCQ9C0C6 399 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 CEP44Q9C0F1 390 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 CLEC1BQ9P126 229 aa12.24□□□□□ -0.45
AP003559.1-201ENST00000540906 PRDM4Q9UKN5 801 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms