RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	THAP11	Q96EK4	314 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PPP1R2P1	Q96PQ5	205 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLC2A11	Q9BYW1	496 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NAA50	Q9GZZ1	169 aa	Known RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PLGRKT	Q9HBL7	147 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SIX4	Q9UIU6	781 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CDH7	Q9ULB5	785 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLC39A10	Q9ULF5	831 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	YBX2	Q9Y2T7	364 aa	Known RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	HCFC2	Q9Y5Z7	792 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		A0A1W2PPW3	197 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MYBPHL	A2RUH7	354 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TMEM221	A6NGB7	291 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZNF839	A8K0R7	811 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		M0QYT0	321 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ACOT8	O14734	319 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TGM5	O43548	720 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	BCAS2	O75934	225 aa	Predicted RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ATE1	O95260	518 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	APOD	P05090	189 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ALOX15	P16050	662 aa	Predicted RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CD247	P20963	164 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PSMB4	P28070	264 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PBX2	P40425	430 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GRIA4	P48058	902 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SOX4	Q06945	474 aa	Predicted RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PDAP1	Q13442	181 aa	Known RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	BRMS1L	Q5PSV4	323 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZFP1	Q6P2D0	407 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RPS27L	Q71UM5	84 aa	Known RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GPR141	Q7Z602	305 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CDKL3	Q8IVW4	592 aa	Predicted RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	OR52K1	Q8NGK4	314 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	BPIFB1	Q8TDL5	484 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CLEC4C	Q8WTT0	213 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZNF669	Q96BR6	464 aa	Predicted RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RPRD1A	Q96P16	312 aa	Predicted RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RANBP9	Q96S59	729 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLC39A3	Q9BRY0	314 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FRMD8	Q9BZ67	464 aa	Predicted RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SIK2	Q9H0K1	926 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	C8orf33	Q9H7E9	229 aa	Predicted RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SLC25A13	Q9UJS0	675 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PRPF19	Q9UMS4	504 aa	Known RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SCN10A	Q9Y5Y9	1956 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MEIS3P2	A8K0S8	358 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		H0Y626	953 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783		H3BNH8	94 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	KCNK1	O00180	336 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GIPC1	O14908	333 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GRID2	O43424	1007 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	C2	P06681	752 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RHO	P08100	348 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MYOG	P15173	224 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	BNIP3	Q12983	259 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	KIAA0319	Q5VV43	1072 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RETSAT	Q6NUM9	610 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PMF1	Q6P1K2	205 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZBTB49	Q6ZSB9	765 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GRASP	Q7Z6J2	395 aa	Predicted RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RP9	Q8TA86	221 aa	Known RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ACMSD	Q8TDX5	336 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	WFIKKN2	Q8TEU8	576 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	LPGAT1	Q92604	370 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ISOC1	Q96CN7	298 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RTP4	Q96DX8	246 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RPL10L	Q96L21	214 aa	Known RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TBCB	Q99426	244 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CDX2	Q99626	313 aa	Predicted RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SPON2	Q9BUD6	331 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	EFCAB1	Q9HAE3	211 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	IL1RL2	Q9HB29	575 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	NMRAL1	Q9HBL8	299 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SMPD4	Q9NXE4	827 aa		5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	COPG1	Q9Y678	874 aa	Known RBP	5.68	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MATN2	O00339	956 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	SOCS2	O14508	198 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	HDAC3	O15379	428 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	AKAP10	O43572	662 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	DAB1	O75553	588 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZBTB11	O95625	1053 aa	Predicted RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GOT1	P17174	413 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TGM2	P21980	687 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ITGB8	P26012	769 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CNTF	P26441	200 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PRDX6	P30041	224 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PPARG	P37231	505 aa	Predicted RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	GP5	P40197	560 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	YAP1	P46937	504 aa	Known RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ALDH3B2	P48448	385 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CD97	P48960	835 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	RPL14	P50914	215 aa	Known RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	AIF1	P55008	147 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	PSME3	P61289	254 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	ZNF460	Q14592	562 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	CBX2	Q14781	532 aa	Predicted RBP	5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	TGFBI	Q15582	683 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	MPPE1	Q53F39	396 aa		5.67	□□□□□ -1.5
RAPGEF4-215	ENST00000540783	FGD3	Q5JSP0	725 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms