RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 FNIP2Q9P278 1114 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 HEMK1Q9Y5R4 338 aaPredicted RBP12.29□□□□□ -0.44
NPC1-202ENST00000540608 CASTOR2A6NHX0 329 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 ANGPT2O15123 496 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 MSI1O43347 362 aaKnown RBP12.29□□□□□ -0.44
NPC1-202ENST00000540608 MATN4O95460 622 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 C7P10643 843 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 CD1DP15813 335 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 PSMA4P25789 261 aaKnown RBP12.29□□□□□ -0.44
NPC1-202ENST00000540608 RPL10P27635 214 aaKnown RBP12.29□□□□□ -0.44
NPC1-202ENST00000540608 NRG1Q02297 640 aaPredicted RBP12.29□□□□□ -0.44
NPC1-202ENST00000540608 MAP2K5Q13163 448 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 ATP6AP1Q15904 470 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 UPP1Q16831 310 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 SLC36A3Q495N2 470 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 PHYKPLQ8IUZ5 450 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 ZNF786Q8N393 782 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 PPP1R14BQ96C90 147 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 CENPNQ96H22 339 aaPredicted RBP12.29□□□□□ -0.44
NPC1-202ENST00000540608 PHF12Q96QT6 1004 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 NOL6Q9H6R4 1146 aaKnown RBP12.29□□□□□ -0.44
NPC1-202ENST00000540608 C8orf4Q9NR00 106 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 FAM105AQ9NUU6 356 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 POLR3BQ9NW08 1133 aaPredicted RBP12.29□□□□□ -0.44
NPC1-202ENST00000540608 HS3ST4Q9Y661 456 aa12.29□□□□□ -0.44
NPC1-202ENST00000540608 FXYD1O00168 92 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 AZIN1O14977 448 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 ODC1P11926 461 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 CAPN3P20807 821 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 CD86P42081 329 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 ARSDP51689 593 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 ILF2Q12905 390 aaKnown RBP12.28□□□□□ -0.44
NPC1-202ENST00000540608 GRB7Q14451 532 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 KLHL35Q6PF15 583 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 SPRED1Q7Z699 444 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 GPR180Q86V85 440 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 PIM3Q86V86 326 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 CLVS1Q8IUQ0 354 aaPredicted RBP12.28□□□□□ -0.44
NPC1-202ENST00000540608 CMTR2Q8IYT2 770 aaKnown RBP12.28□□□□□ -0.44
NPC1-202ENST00000540608 BBS5Q8N3I7 341 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 PTGR2Q8N8N7 351 aaPredicted RBP12.28□□□□□ -0.44
NPC1-202ENST00000540608 OR52K2Q8NGK3 314 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 SH3RF2Q8TEC5 729 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 TWIST2Q8WVJ9 160 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 FATE1Q969F0 183 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 ISOC1Q96CN7 298 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 LRRC58Q96CX6 371 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 MYRFLQ96LU7 910 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 FAM210AQ96ND0 272 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 CYP2S1Q96SQ9 504 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 PKMYT1Q99640 499 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 OSBPL6Q9BZF3 934 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 PLGRKTQ9HBL7 147 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 MID1IP1Q9NPA3 183 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 NT5MQ9NPB1 228 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 RGS18Q9NS28 235 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 MARCH4Q9P2E8 410 aaPredicted RBP12.28□□□□□ -0.44
NPC1-202ENST00000540608 EGFL7Q9UHF1 273 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 TTC24A2A3L6 582 aaPredicted RBP12.28□□□□□ -0.44
NPC1-202ENST00000540608 FAM149AA5PLN7 773 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 GLTPD2A6NH11 291 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 ARL5CA6NH57 179 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 PIP5K1BO14986 540 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 MMP2P08253 660 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 FDXRP22570 491 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 SLC6A2P23975 617 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 HOXC8P31273 242 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 CCT8P50990 548 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 MLLT6P55198 1093 aaPredicted RBP12.28□□□□□ -0.44
NPC1-202ENST00000540608 FOXM1Q08050 763 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 ITKQ08881 620 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 COQ5Q5HYK3 327 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 SPRYD7Q5W111 196 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 KANK2Q63ZY3 851 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 RAB44Q7Z6P3 723 aaPredicted RBP12.28□□□□□ -0.44
NPC1-202ENST00000540608 METTL23Q86XA0 190 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 ADGRG5Q8IZF4 528 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 TRPV3Q8NET8 790 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 C1orf74Q96LT6 269 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 SDR39U1Q9NRG7 319 aaPredicted RBP12.28□□□□□ -0.44
NPC1-202ENST00000540608 EBF1Q9UH73 591 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 ST3GAL5Q9UNP4 418 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 CRYL1Q9Y2S2 319 aa12.28□□□□□ -0.44
NPC1-202ENST00000540608 RNF103-CHMP3A0A140T963 221 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 CCL22O00626 93 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 PPP6CO00743 305 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 RASAL1O95294 804 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 GPIP06744 558 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 LBPP18428 481 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 UGT1A6P19224 532 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 PGFP49763 221 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 SCNN1GP51170 649 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 MAXP61244 160 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 CAPRIN1Q14444 709 aaKnown RBP12.27□□□□□ -0.44
NPC1-202ENST00000540608 PAN2Q504Q3 1202 aaKnown RBP12.27□□□□□ -0.44
NPC1-202ENST00000540608 MARC1Q5VT66 337 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 LRRTM3Q86VH5 581 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 UMODL1-AS1Q8N2C9 162 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 FNDC8Q8TC99 324 aa12.27□□□□□ -0.44
NPC1-202ENST00000540608 HIPK3Q9H422 1215 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms