RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 TFAMQ00059 246 aaKnown RBP9.47□□□□□ -0.89
CLIP1-214ENST00000540539 CYP4F3Q08477 520 aa9.47□□□□□ -0.89
CLIP1-214ENST00000540539 SLAMF1Q13291 335 aa9.47□□□□□ -0.89
CLIP1-214ENST00000540539 PPIL2Q13356 520 aa9.47□□□□□ -0.89
CLIP1-214ENST00000540539 GPR50Q13585 617 aa9.47□□□□□ -0.89
CLIP1-214ENST00000540539 KCNJ11Q14654 390 aa9.47□□□□□ -0.89
CLIP1-214ENST00000540539 IQCCQ4KMZ1 466 aa9.47□□□□□ -0.89
CLIP1-214ENST00000540539 ZBTB37Q5TC79 503 aa9.47□□□□□ -0.89
CLIP1-214ENST00000540539 CDC42EP5Q6NZY7 148 aa9.47□□□□□ -0.89
CLIP1-214ENST00000540539 RHPN2Q8IUC4 686 aa9.47□□□□□ -0.89
CLIP1-214ENST00000540539 FAM71DQ8N9W8 422 aa9.47□□□□□ -0.89
CLIP1-214ENST00000540539 ENKURQ8TC29 256 aa9.47□□□□□ -0.89
CLIP1-214ENST00000540539 PRMT6Q96LA8 375 aaPredicted RBP9.47□□□□□ -0.89
CLIP1-214ENST00000540539 MBOAT7Q96N66 472 aa9.47□□□□□ -0.89
CLIP1-214ENST00000540539 NECTIN4Q96NY8 510 aa9.47□□□□□ -0.89
CLIP1-214ENST00000540539 ACO2Q99798 780 aaKnown RBP9.47□□□□□ -0.89
CLIP1-214ENST00000540539 BEX2Q9BXY8 128 aa9.47□□□□□ -0.89
CLIP1-214ENST00000540539 ZNF224Q9NZL3 707 aa9.47□□□□□ -0.89
CLIP1-214ENST00000540539 TLK1Q9UKI8 766 aa9.47□□□□□ -0.89
CLIP1-214ENST00000540539 AGO1Q9UL18 857 aaKnown RBP9.47□□□□□ -0.89
CLIP1-214ENST00000540539 TCRBV3S1A0A5B6 114 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 RGSL1A5PLK6 1076 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 GPR25O00155 361 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 TRIM38O00635 465 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 SYN3O14994 580 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 ARHGEF9O43307 516 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 STAU1O95793 577 aaKnown RBP9.46□□□□□ -0.89
CLIP1-214ENST00000540539 ASS1P00966 412 aaKnown RBP9.46□□□□□ -0.89
CLIP1-214ENST00000540539 APOA1P02647 267 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 ACADMP11310 421 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 ZNF30P17039 623 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 IL12RB1P42701 662 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 RPL35P42766 123 aaKnown RBP9.46□□□□□ -0.89
CLIP1-214ENST00000540539 CASP4P49662 377 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 MFAP3P55082 362 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 PCDH1Q08174 1060 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 FAPQ12884 760 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 KRR1Q13601 381 aaKnown RBP9.46□□□□□ -0.89
CLIP1-214ENST00000540539 ZNF273Q14593 569 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 CYBRD1Q53TN4 286 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 MBLAC2Q68D91 279 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 CREB3L2Q70SY1 520 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 CATSPER4Q7RTX7 472 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 LDHDQ86WU2 507 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 MAPKAPK5Q8IW41 473 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 SCUBE3Q8IX30 993 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 PALM2Q8IXS6 379 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 ASB12Q8WXK4 309 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 ST8SIA4Q92187 359 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 SLC9A6Q92581 669 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 RIT1Q92963 219 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 PTP4A1Q93096 173 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 MUL1Q969V5 352 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 LRRC39Q96DD0 335 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 ZSCAN10Q96SZ4 725 aaPredicted RBP9.46□□□□□ -0.89
CLIP1-214ENST00000540539 SORT1Q99523 831 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 MLPHQ9BV36 600 aaPredicted RBP9.46□□□□□ -0.89
CLIP1-214ENST00000540539 HDHD5Q9BXW7 423 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 MYOZ2Q9NPC6 264 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 KMT5AQ9NQR1 393 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 CD274Q9NZQ7 290 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 STOML2Q9UJZ1 356 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 DTX4Q9Y2E6 619 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 FOCADQ5VW36 1801 aa9.46□□□□□ -0.89
CLIP1-214ENST00000540539 SMIM22K7EJ46 135 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 PAPSS1O43252 624 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-214ENST00000540539 AVILO75366 819 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 ALOX12P18054 663 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 ADORA2AP29274 412 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 ARRB2P32121 409 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 CAPZA2P47755 286 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 ABRQ12979 859 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 KCTD2Q14681 263 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 DPY19L1Q2PZI1 675 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 GPAT3Q53EU6 434 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 FASTKD1Q53R41 847 aaKnown RBP9.46□□□□□ -0.9
CLIP1-214ENST00000540539 GPATCH4Q5T3I0 446 aaKnown RBP9.46□□□□□ -0.9
CLIP1-214ENST00000540539 ANKRD22Q5VYY1 191 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 ALG1LQ6GMV1 187 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 CYP2R1Q6VVX0 501 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 ARHGAP36Q6ZRI8 547 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 USP51Q70EK9 711 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 PIGZQ86VD9 579 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 PLCZ1Q86YW0 608 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 P3H2Q8IVL5 708 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 DHRSXQ8N5I4 330 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 MTMR14Q8NCE2 650 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 BEST2Q8NFU1 509 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 OR6P1Q8NGX9 317 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 KLHL6Q8WZ60 621 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 SLC7A6Q92536 515 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 PCDHB18PQ96TA0 734 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 REXO4Q9GZR2 422 aaKnown RBP9.46□□□□□ -0.9
CLIP1-214ENST00000540539 LHX5Q9H2C1 402 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 TDRD3Q9H7E2 651 aaKnown RBP9.46□□□□□ -0.9
CLIP1-214ENST00000540539 TM9SF3Q9HD45 589 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 DCP1AQ9NPI6 582 aaPredicted RBP9.46□□□□□ -0.9
CLIP1-214ENST00000540539 PLSCR2Q9NRY7 297 aa9.46□□□□□ -0.9
CLIP1-214ENST00000540539 CCDC59Q9P031 241 aaKnown RBP9.46□□□□□ -0.9
CLIP1-214ENST00000540539 KIF17Q9P2E2 1029 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms