RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 ARL4AP40617 200 aa11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 LIMK2P53671 638 aa11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 OR1D5P58170 312 aa11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 DPTQ07507 201 aa11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 BIRC2Q13490 618 aa11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 AMZ1Q400G9 498 aa11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 BOLA3Q53S33 107 aa11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 VASH2Q86V25 355 aa11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 CCDC112Q8NEF3 446 aa11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 SCRN2Q96FV2 425 aa11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 SCARF2Q96GP6 870 aaPredicted RBP11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 TAAR9Q96RI9 348 aa11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 MCCC1Q96RQ3 725 aaPredicted RBP11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 HSD3B7Q9H2F3 369 aa11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 RDH14Q9HBH5 336 aa11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 MRPL47Q9HD33 250 aaKnown RBP11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 CNOT8Q9UFF9 292 aaKnown RBP11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 SUFUQ9UMX1 484 aa11.99□□□□□ -0.49
CBX3P4-202ENST00000540428 UNC13CQ8NB66 2214 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 SCN8AQ9UQD0 1980 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 IGHV5-10-1A0A0J9YXX1 117 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 TERTO14746 1132 aaKnown RBP11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 MAFKO60675 156 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 PGLSO95336 258 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 FTLP02792 175 aaPredicted RBP11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 MYBL1P10243 752 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 CCL4P13236 92 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 KRT10P13645 584 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 LHCGRP22888 699 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 AK4P27144 223 aaPredicted RBP11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 CD1CP29017 333 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 ADCY8P40145 1251 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 ETV3P41162 512 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 PRKCIP41743 596 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 GNPDA1P46926 289 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 ATP1A2P50993 1020 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 CTBSQ01459 385 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 TRAF2Q12933 501 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 TBR1Q16650 682 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 RAET1GQ6H3X3 334 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 TMCO3Q6UWJ1 677 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 ZNF574Q6ZN55 896 aaPredicted RBP11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 ATG14Q6ZNE5 492 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 USP45Q70EL2 814 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 HSD11B1LQ7Z5J1 315 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 TECPR1Q7Z6L1 1165 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 NLRP8Q86W28 1048 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 TP53INP2Q8IXH6 220 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 NAGSQ8N159 534 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 PGBD5Q8N414 524 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 OR4D9Q8NGE8 314 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 PDCD6IPQ8WUM4 868 aaKnown RBP11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 NSMCE1Q8WV22 266 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 TRIM11Q96F44 468 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 NUDT22Q9BRQ3 303 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 DDA1Q9BW61 102 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 TRIM7Q9C029 511 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 CDH19Q9H159 772 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 HAUS4Q9H6D7 363 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 NOD2Q9HC29 1040 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 AIPL1Q9NZN9 384 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 IL17BQ9UHF5 180 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 TENM4Q6N022 2769 aa11.98□□□□□ -0.49
CBX3P4-202ENST00000540428 TTC24A2A3L6 582 aaPredicted RBP11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 NPIPB15A6NHN6 443 aaPredicted RBP11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 LRRC53A6NM62 1247 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 PYCARD-AS1I3L0S3 204 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 ARHGAP6O43182 974 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 SUV39H1O43463 412 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 PPFIA2O75334 1257 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 PYGLP06737 847 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 FAM87AP0C7U9 286 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 THRAP10827 490 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 FGF3P11487 239 aaPredicted RBP11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 WT1P19544 449 aaPredicted RBP11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 SERPINB6P35237 376 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 CDH6P55285 790 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 GPLD1P80108 840 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 ASIC2Q16515 512 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 ARMC12Q5T9G4 340 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 MARC1Q5VT66 337 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 DENND2CQ68D51 928 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 SLC30A9Q6PML9 568 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 ADAMTSL4Q6UY14 1074 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 Q6ZVL8 140 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 ZNF571Q7Z3V5 609 aaPredicted RBP11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 POLNQ7Z5Q5 900 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 LRRC49Q8IUZ0 686 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 RAVER1Q8IY67 606 aaKnown RBP11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 NDUFAF2Q8N183 169 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 ATPAF2Q8N5M1 289 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 AGBL5Q8NDL9 886 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 HTR3CQ8WXA8 447 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 NKD1Q969G9 470 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 ZNF653Q96CK0 615 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 CCDC74BQ96LY2 380 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 CSPG4P5Q96PW8 444 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 OR2M4Q96R27 311 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 FUCA2Q9BTY2 467 aa11.97□□□□□ -0.49
CBX3P4-202ENST00000540428 ADNPQ9H2P0 1102 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms