RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 STYXQ8WUJ0 223 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 DNAJC1Q96KC8 554 aaKnown RBP18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 WRAP53Q9BUR4 548 aaKnown RBP18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 EPB41L4BQ9H329 900 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 BPIFA1Q9NP55 256 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 FBXO4Q9UKT5 387 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 RIMKLBQ9ULI2 386 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 NCKAP1Q9Y2A7 1128 aa18.91■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CCL22O00626 93 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 STX7O15400 261 aaKnown RBP18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 SLC7A4O43246 635 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PLRG1O43660 514 aaKnown RBP18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ACSL3O95573 720 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TDGF1P13385 188 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 LIG3P49916 1009 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CCR3P51677 355 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ARSDP51689 593 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 STC1P52823 247 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TMPRSS15P98073 1019 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PDE1BQ01064 536 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ACVR1Q04771 509 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 SFSWAPQ12872 951 aaKnown RBP18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 UAP1Q16222 522 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 C3orf62Q6ZUJ4 267 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ASCL5Q7RTU5 278 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 HSD11B1LQ7Z5J1 315 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CBARPQ8N350 705 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 CAMKK1Q8N5S9 505 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 OR14C36Q8NHC7 312 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PEX13Q92968 403 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TTC25Q96NG3 672 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TPSD1Q9BZJ3 242 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 VPS37BQ9H9H4 285 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PRMT8Q9NR22 394 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 NLE1Q9NVX2 485 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ARGLU1Q9NWB6 273 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 FAM169AQ9Y6X4 670 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 OTOGLQ3ZCN5 2332 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 FRYLO94915 3013 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 GOLGA8CPA6NN73 597 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 RIPK2O43353 540 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 GFRA3O60609 400 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ELFN1P0C7U0 828 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PSMA3P25788 255 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 ADPRHP54922 357 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 SKIDA1Q1XH10 827 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 SPANXN3Q5MJ09 141 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TRMT10BQ6PF06 316 aaKnown RBP18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 RFLNAQ6ZTI6 216 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 UNC5BQ8IZJ1 945 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 TBATAQ96M53 351 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 IL1RAPL1Q9NZN1 696 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PKP3Q9Y446 797 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 R4GN57 208 aa18.9■□□□□ 0.62
TNFRSF1A-213ENST00000540022 PRR23AA6NEV1 266 aa18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TSPAN6O43657 245 aa18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 MMP20O60882 483 aa18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 PCDH8O95206 1070 aa18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 IGLV3-19P01714 112 aa18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TSHRP16473 764 aa18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 GM2AP17900 193 aa18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ARNTP27540 789 aa18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ACSL1P33121 698 aa18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 CSTF1Q05048 431 aaKnown RBP18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 SMAD1Q15797 465 aaKnown RBP18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ZNF528Q3MIS6 628 aa18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 MREGQ8N565 214 aa18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 UHMK1Q8TAS1 419 aaKnown RBP18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 GSDMBQ8TAX9 411 aa18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 CXorf40AQ8TE69 158 aa18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 UBLCP1Q8WVY7 318 aaPredicted RBP18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 CDKN2AIPNLQ96HQ2 116 aa18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 SUDS3Q9H7L9 328 aaPredicted RBP18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 COQ6Q9Y2Z9 468 aa18.89■□□□□ 0.61
TNFRSF1A-213ENST00000540022 GVINP1Q7Z2Y8 2422 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 PSMD11O00231 422 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 RPP40O75818 363 aaKnown RBP18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 VAPBO95292 243 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 GSTA2P09210 222 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 C6P13671 934 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 BPIP17213 487 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 HSD17B3P37058 310 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 SPINT3P49223 89 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 SLC29A2Q14542 456 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 KIAA0930Q6ICG6 404 aaPredicted RBP18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 Q6ZVL8 140 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 GPR26Q8NDV2 337 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 HDAC10Q969S8 669 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 COQ10AQ96MF6 247 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 BTBD1Q9H0C5 482 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ARFGAP3Q9NP61 516 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 MOCS1Q9NZB8 636 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 FKBPLQ9UIM3 349 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 CYP8B1Q9UNU6 501 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ZFR2Q9UPR6 939 aaKnown RBP18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 GPR179Q6PRD1 2367 aa18.88■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TCRBV9S1A1TA0A576 114 aa18.87■□□□□ 0.61
TNFRSF1A-213ENST00000540022 SPAG6O75602 509 aa18.87■□□□□ 0.61
TNFRSF1A-213ENST00000540022 PAMP19021 973 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms