RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 RGRP47804 291 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 NDST2P52849 883 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 RHOAP61586 193 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 TLE1Q04724 770 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 DPYSQ14117 519 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 NFATC4Q14934 902 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 LRRC14Q15048 493 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 IGFBP7Q16270 282 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 AMZ1Q400G9 498 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 RAD9BQ6WBX8 426 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 ATG14Q6ZNE5 492 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 TMEM139Q8IV31 216 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 GRAMD1AQ96CP6 724 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 HMCESQ96FZ2 354 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 C1QTNF7Q9BXJ2 289 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 STRADBQ9C0K7 418 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 TMEM168Q9H0V1 697 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 PCDH12Q9NPG4 1184 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 CWC15Q9P013 229 aaKnown RBP14.99□□□□□ -0.01
USB1-203ENST00000539737 LHX3Q9UBR4 397 aa14.99□□□□□ -0.01
USB1-203ENST00000539737 BUB1BO60566 1050 aaPredicted RBP14.98□□□□□ -0.01
USB1-203ENST00000539737 ERCC2P18074 760 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 MPSTP25325 297 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 CCKBRP32239 447 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 NOP2P46087 812 aaKnown RBP14.98□□□□□ -0.01
USB1-203ENST00000539737 CDH6P55285 790 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 OR1D5P58170 312 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 YPEL5P62699 121 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 ELOCQ15369 112 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 CYTH1Q15438 398 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 INO80DQ53TQ3 878 aaPredicted RBP14.98□□□□□ -0.01
USB1-203ENST00000539737 CFAP58Q5T655 872 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 TXNRD3NBQ6F5E7 133 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 SPRED1Q7Z699 444 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 MAP7D3Q8IWC1 876 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 FSTL5Q8N475 847 aaPredicted RBP14.98□□□□□ -0.01
USB1-203ENST00000539737 LZTR1Q8N653 840 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 PAF1Q8N7H5 531 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 CCDC112Q8NEF3 446 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 FAM46DQ8NEK8 389 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 GPR156Q8NFN8 814 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 PATE1Q8WXA2 126 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 NSMCE3Q96MG7 304 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 CSPG4P5Q96PW8 444 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 NUDT22Q9BRQ3 303 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 PCDH18Q9HCL0 1135 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 MOSPD1Q9UJG1 213 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 TEX15Q9BXT5 2789 aa14.98□□□□□ -0.01
USB1-203ENST00000539737 TTC24A2A3L6 582 aaPredicted RBP14.97□□□□□ -0.01
USB1-203ENST00000539737 ARHGAP42A6NI28 874 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 BTNL10A8MVZ5 291 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 RASA4BC9J798 803 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 RASA4O43374 803 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 SPOPO43791 374 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 SERPINB6P35237 376 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 LIG3P49916 1009 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 VAV2P52735 878 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 TAS2R40P59535 323 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 ZFP36L1Q07352 338 aaKnown RBP14.97□□□□□ -0.01
USB1-203ENST00000539737 GRM3Q14832 879 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 PDK2Q15119 407 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 TMEM52BQ4KMG9 183 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 LRRC38Q5VT99 294 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 HIST2H2BCQ6DN03 193 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 C11orf63Q6NUN7 778 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 TMCO3Q6UWJ1 677 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 TAF8Q7Z7C8 310 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 KIAA1328Q86T90 577 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 SLITRK4Q8IW52 837 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 ACRBPQ8NEB7 543 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 FAM71BQ8TC56 605 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 ZNF670Q9BS34 389 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 LGR4Q9BXB1 951 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 LRRC19Q9H756 370 aa14.97□□□□□ -0.01
USB1-203ENST00000539737 B4GAT1O43505 415 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 NRDCO43847 1150 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 ALPIP09923 528 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 GM2AP17900 193 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 MLLT3P42568 568 aaPredicted RBP14.96□□□□□ -0.01
USB1-203ENST00000539737 SERINC3Q13530 473 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 PTPRRQ15256 657 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 MAP9Q49MG5 647 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 CERCAMQ5T4B2 595 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 ZFYVE27Q5T4F4 411 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 NKAIN2Q5VXU1 208 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 ZNF574Q6ZN55 896 aaPredicted RBP14.96□□□□□ -0.01
USB1-203ENST00000539737 GKN2Q86XP6 184 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 DTX1Q86Y01 620 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 CPNE8Q86YQ8 564 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 CAMK1DQ8IU85 385 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 KCTD6Q8NC69 237 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 WDR48Q8TAF3 677 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 TBATAQ96M53 351 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 WDR92Q96MX6 357 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 TMEM74Q96NL1 305 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 RBM15Q96T37 977 aaKnown RBP eCLIP14.96□□□□□ -0.01
USB1-203ENST00000539737 EPN3Q9H201 632 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 TMEM9Q9P0T7 183 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 LRIT1Q9P2V4 623 aa14.96□□□□□ -0.01
USB1-203ENST00000539737 UBA2Q9UBT2 640 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms