RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 RTP3Q9BQQ7 232 aa9.67□□□□□ -0.86
CDH13-204ENST00000539548 NPLQ9BXD5 320 aaPredicted RBP9.67□□□□□ -0.86
CDH13-204ENST00000539548 YTHDF1Q9BYJ9 559 aaKnown RBP9.67□□□□□ -0.86
CDH13-204ENST00000539548 SLC52A3Q9NQ40 469 aa9.67□□□□□ -0.86
CDH13-204ENST00000539548 FAIMQ9NVQ4 179 aa9.67□□□□□ -0.86
CDH13-204ENST00000539548 PCDHA9Q9Y5H5 950 aa9.67□□□□□ -0.86
CDH13-204ENST00000539548 RNF103-CHMP3A0A140T963 221 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 WASH4PA8MWX3 477 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 AZIN1O14977 448 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 PEX11BO96011 259 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 THP07101 528 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 GFAPP14136 432 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 CD1DP15813 335 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 LBPP18428 481 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 BDNFP23560 247 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 CCR1P32246 355 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 ENTPD1P49961 510 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 SCNN1BP51168 640 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 CLCNKBP51801 687 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 CDH13P55290 713 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 CTBSQ01459 385 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 NRG1Q02297 640 aaPredicted RBP9.66□□□□□ -0.86
CDH13-204ENST00000539548 GRB7Q14451 532 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 KANK2Q63ZY3 851 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 DUS1LQ6P1R4 473 aaKnown RBP9.66□□□□□ -0.86
CDH13-204ENST00000539548 BLOC1S3Q6QNY0 202 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 LYSMD3Q7Z3D4 306 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 ZNF554Q86TJ5 538 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 TERB1Q8NA31 727 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 PAPD5Q8NDF8 572 aaKnown RBP9.66□□□□□ -0.86
CDH13-204ENST00000539548 C3orf58Q8NDZ4 430 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 FATE1Q969F0 183 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 PTERQ96BW5 349 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 LRRC58Q96CX6 371 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 CXorf21Q9HAI6 301 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 IL1RL2Q9HB29 575 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 SDR39U1Q9NRG7 319 aaPredicted RBP9.66□□□□□ -0.86
CDH13-204ENST00000539548 ABCC13Q9NSE7 274 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 POLR3BQ9NW08 1133 aaPredicted RBP9.66□□□□□ -0.86
CDH13-204ENST00000539548 EGFL7Q9UHF1 273 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 ZNF510Q9Y2H8 683 aa9.66□□□□□ -0.86
CDH13-204ENST00000539548 ZFC3H1O60293 1989 aaKnown RBP9.66□□□□□ -0.86
CDH13-204ENST00000539548 FAM149AA5PLN7 773 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 TRIM64BA6NI03 449 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 HAS3O00219 553 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 PIP5K1BO14986 540 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 ARPC2O15144 300 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 CLOCKO15516 846 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 CLASP2O75122 1294 aaKnown RBP9.65□□□□□ -0.86
CDH13-204ENST00000539548 VPS4BO75351 444 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 DDNO94850 711 aaPredicted RBP9.65□□□□□ -0.86
CDH13-204ENST00000539548 HOXB8P17481 243 aaPredicted RBP9.65□□□□□ -0.86
CDH13-204ENST00000539548 UGT1A6P19224 532 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 FDXRP22570 491 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 DCKP27707 260 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 RPL9P32969 192 aaKnown RBP9.65□□□□□ -0.86
CDH13-204ENST00000539548 PSEN2P49810 448 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 RENBPP51606 427 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 RAB15P59190 212 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 FAM219BQ5XKK7 198 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 ELMSAN1Q6PJG2 1045 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 ABRAXAS1Q6UWZ7 409 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 RAB44Q7Z6P3 723 aaPredicted RBP9.65□□□□□ -0.86
CDH13-204ENST00000539548 PTRH1Q86Y79 214 aaKnown RBP9.65□□□□□ -0.86
CDH13-204ENST00000539548 PTGR2Q8N8N7 351 aaPredicted RBP9.65□□□□□ -0.86
CDH13-204ENST00000539548 PNPLA1Q8N8W4 532 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 KLHL23Q8NBE8 558 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 OR6P1Q8NGX9 317 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 TWIST2Q8WVJ9 160 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 HDAC10Q969S8 669 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 ACBD6Q9BR61 282 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 MUC3BQ9H195 1237 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 SMOC2Q9H3U7 446 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 NOL6Q9H6R4 1146 aaKnown RBP9.65□□□□□ -0.86
CDH13-204ENST00000539548 MID1IP1Q9NPA3 183 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 MIOSQ9NXC5 875 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 FADS3Q9Y5Q0 445 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 KANSL1LA0AUZ9 987 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 MEIS3P2A8K0S8 358 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 E9PAM4 449 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 PPP6CO00743 305 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 MAGEB3O15480 346 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 SNAP91O60641 907 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 UMPSP11172 480 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 IDO1P14902 403 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 HMOX2P30519 316 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 CAPGP40121 348 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 MRPL19P49406 292 aaKnown RBP9.65□□□□□ -0.86
CDH13-204ENST00000539548 ARSDP51689 593 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 MLLT6P55198 1093 aaPredicted RBP9.65□□□□□ -0.86
CDH13-204ENST00000539548 TIAL1Q01085 375 aaKnown RBP eCLIP9.65□□□□□ -0.86
CDH13-204ENST00000539548 GRIK2Q13002 908 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 PMS2P3Q13401 168 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 CAPRIN1Q14444 709 aaKnown RBP9.65□□□□□ -0.86
CDH13-204ENST00000539548 GRB14Q14449 540 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 TIGD5Q53EQ6 642 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 C14orf80Q86SX3 495 aa9.65□□□□□ -0.86
CDH13-204ENST00000539548 PATL1Q86TB9 770 aaKnown RBP9.65□□□□□ -0.86
CDH13-204ENST00000539548 LDB1Q86U70 411 aaPredicted RBP9.65□□□□□ -0.86
CDH13-204ENST00000539548 DCP1BQ8IZD4 617 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms