RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 ZNF711Q9Y462 761 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 TDRD6O60522 2096 aaKnown RBP15.73■□□□□ 0.11
RPAIN-206ENST00000539417 SCN8AQ9UQD0 1980 aa15.73■□□□□ 0.11
RPAIN-206ENST00000539417 BUD23O43709 281 aaKnown RBP15.72■□□□□ 0.11
RPAIN-206ENST00000539417 STK10O94804 968 aaKnown RBP15.72■□□□□ 0.11
RPAIN-206ENST00000539417 IFNB1P01574 187 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 ZNF30P17039 623 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 RXRGP48443 463 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 CCT8P50990 548 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 MSLNQ13421 630 aaPredicted RBP15.72■□□□□ 0.11
RPAIN-206ENST00000539417 MTM1Q13496 603 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 KCTD11Q693B1 232 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 ESRP1Q6NXG1 681 aaKnown RBP15.72■□□□□ 0.11
RPAIN-206ENST00000539417 RANBP10Q6VN20 620 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 DBX2Q6ZNG2 339 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 ARHGEF18Q6ZSZ5 1173 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 TMC3Q7Z5M5 1100 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 RBFAQ8N0V3 343 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 SAP25Q8TEE9 199 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 PTCD2Q8WV60 388 aaKnown RBP15.72■□□□□ 0.11
RPAIN-206ENST00000539417 RTKNQ9BST9 563 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 FRMD8P1Q9BZ68 369 aaPredicted RBP15.72■□□□□ 0.11
RPAIN-206ENST00000539417 MAGEE1Q9HCI5 957 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 CABIN1Q9Y6J0 2220 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 LRP4O75096 1905 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 MYLKQ15746 1914 aa15.72■□□□□ 0.11
RPAIN-206ENST00000539417 GOLGA6CA6NDK9 693 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 GOLGA6BA6NDN3 693 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 TMEM202A6NGA9 273 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 ANXA9O76027 345 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 EPOP01588 193 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 ITGAVP06756 1048 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 ZNF883P0CG24 379 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 GOLGA6DP0CG33 693 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 EPHA8P29322 1005 aaPredicted RBP15.71■□□□□ 0.11
RPAIN-206ENST00000539417 RPL22P35268 128 aaKnown RBP15.71■□□□□ 0.11
RPAIN-206ENST00000539417 TRIM23P36406 574 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 SPINT3P49223 89 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 PTPRCAPQ14761 206 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 PARP6Q2NL67 630 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 DRICH1Q6PGQ1 229 aaPredicted RBP15.71■□□□□ 0.11
RPAIN-206ENST00000539417 TTC30BQ8N4P2 665 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 PDCD7Q8N8D1 485 aaKnown RBP15.71■□□□□ 0.11
RPAIN-206ENST00000539417 GPR26Q8NDV2 337 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 FERMT1Q9BQL6 677 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 RIOK2Q9BVS4 552 aaKnown RBP15.71■□□□□ 0.11
RPAIN-206ENST00000539417 ZFYVE1Q9HBF4 777 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 BPIFA1Q9NP55 256 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 KCND1Q9NSA2 647 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 PIH1D1Q9NWS0 290 aaKnown RBP15.71■□□□□ 0.11
RPAIN-206ENST00000539417 DNAJC28Q9NX36 388 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 GOLGA6AQ9NYA3 693 aa15.71■□□□□ 0.11
RPAIN-206ENST00000539417 TTC7AQ9ULT0 858 aaPredicted RBP15.71■□□□□ 0.11
RPAIN-206ENST00000539417 FADS2P1A8MWK0 482 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 MAGEC1O60732 1142 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 FUCA1P04066 466 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 GIMD1P0DJR0 217 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 NFKBIAP25963 317 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 STIP1P31948 543 aaKnown RBP15.71■□□□□ 0.1
RPAIN-206ENST00000539417 YPEL5P62699 121 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 PUM1Q14671 1186 aaKnown RBP eCLIP15.71■□□□□ 0.1
RPAIN-206ENST00000539417 NFATC4Q14934 902 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 TCEA2Q15560 299 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 ALG11Q2TAA5 492 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 P3H1Q32P28 736 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 ALS2CLQ60I27 953 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 RAET1GQ6H3X3 334 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 TRIM74Q86UV6 250 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 HEATR4Q86WZ0 1026 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 NAXDQ8IW45 347 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 SLC25A45Q8N413 288 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 FAM174AQ8TBP5 190 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 BLOC1S5Q8TDH9 187 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 TSACCQ96A04 125 aaPredicted RBP15.71■□□□□ 0.1
RPAIN-206ENST00000539417 AP2M1Q96CW1 435 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 TBL1YQ9BQ87 522 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 FSD1LQ9BXM9 530 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 ETNK1Q9HBU6 452 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 MRPL40Q9NQ50 206 aaKnown RBP15.71■□□□□ 0.1
RPAIN-206ENST00000539417 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.71■□□□□ 0.1
RPAIN-206ENST00000539417 DRG1Q9Y295 367 aaKnown RBP15.71■□□□□ 0.1
RPAIN-206ENST00000539417 AAR2Q9Y312 384 aaKnown RBP15.71■□□□□ 0.1
RPAIN-206ENST00000539417 KCTD3Q9Y597 815 aa15.71■□□□□ 0.1
RPAIN-206ENST00000539417 PCDHGA12O60330 932 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 CBFA2T3O75081 653 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 CSF2P04141 144 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 CELA2BP08218 269 aaPredicted RBP15.7■□□□□ 0.1
RPAIN-206ENST00000539417 HLA-DPA1P20036 260 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 DGKAP23743 735 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 CA5AP35218 305 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 GRIA1P42261 906 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 THOP1P52888 689 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 DPTQ07507 201 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 SLC14A1Q13336 389 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 PRPSAP1Q14558 356 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 PAPD7Q5XG87 772 aaKnown RBP15.7■□□□□ 0.1
RPAIN-206ENST00000539417 ENPP7Q6UWV6 458 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 MACC1Q6ZN28 852 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 PARGQ86W56 976 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 DCP2Q8IU60 420 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms