RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 HDAC11Q96DB2 347 aa19.04■□□□□ 0.64
TNFRSF1A-212ENST00000539372 NAF1Q96HR8 494 aaKnown RBP19.04■□□□□ 0.64
TNFRSF1A-212ENST00000539372 ZNF830Q96NB3 372 aaPredicted RBP19.04■□□□□ 0.64
TNFRSF1A-212ENST00000539372 LGMNQ99538 433 aa19.04■□□□□ 0.64
TNFRSF1A-212ENST00000539372 TDRD1Q9BXT4 1180 aaKnown RBP19.04■□□□□ 0.64
TNFRSF1A-212ENST00000539372 KCTD5Q9NXV2 234 aa19.04■□□□□ 0.64
TNFRSF1A-212ENST00000539372 HYOU1Q9Y4L1 999 aa19.04■□□□□ 0.64
TNFRSF1A-212ENST00000539372 HEY1Q9Y5J3 304 aa19.04■□□□□ 0.64
TNFRSF1A-212ENST00000539372 CACNA1GO43497 2377 aa19.04■□□□□ 0.64
TNFRSF1A-212ENST00000539372 A0A0J9YYE9 177 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 PMS2P1A4D2B8 440 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 C3orf70A6NLC5 250 aaPredicted RBP19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 AKR1B15C9JRZ8 316 aaPredicted RBP19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 KCNK1O00180 336 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 JCHAINP01591 159 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 TRBC1P01850 177 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 FUCA1P04066 466 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 CEACAM5P06731 702 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 TNNT1P13805 278 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 CES1P23141 567 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 ARHGAP25P42331 645 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 GNPDA1P46926 289 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 POLD2P49005 469 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 PDX1P52945 283 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 CCL7P80098 99 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 PTSQ03393 145 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 FOXR1Q6PIV2 292 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 DOK6Q6PKX4 331 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 RHOT2Q8IXI1 618 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 PLD5Q8N7P1 536 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 Q8N9G6 341 aaPredicted RBP19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 LPCAT1Q8NF37 534 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 GPR156Q8NFN8 814 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 WDR48Q8TAF3 677 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 ZNF578Q96N58 590 aaPredicted RBP19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 FRMD8Q9BZ67 464 aaPredicted RBP19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 DPEP2Q9H4A9 486 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 HAUS2Q9NVX0 235 aa19.03■□□□□ 0.64
TNFRSF1A-212ENST00000539372 NTN3O00634 580 aaPredicted RBP19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 NOBOXO60393 691 aa19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 MTA2O94776 668 aa19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 PRLP01236 227 aa19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 KRT1P04264 644 aa19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 RPLP0P05388 317 aaKnown RBP19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 GPR1P46091 355 aa19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 CNGA4Q8IV77 575 aa19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 LSMEM2Q8N112 164 aa19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 SCAMP4Q969E2 229 aa19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 GRAMD1AQ96CP6 724 aa19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 AP2M1Q96CW1 435 aa19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 MAK16Q9BXY0 300 aaKnown RBP19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 ABCG8Q9H221 673 aa19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 PCDH9Q9HC56 1237 aa19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 AMACRQ9UHK6 382 aa19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 SUFUQ9UMX1 484 aa19.02■□□□□ 0.64
TNFRSF1A-212ENST00000539372 CAPN8A6NHC0 703 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 APOL1O14791 398 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 DXOO77932 396 aaKnown RBP19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 CA4P22748 312 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 CD86P42081 329 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 PCBP4P57723 403 aaKnown RBP19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 DPTQ07507 201 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 PPIDQ08752 370 aaKnown RBP19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 AP1B1Q10567 949 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 ZBTB17Q13105 803 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 TBX2Q13207 712 aaPredicted RBP19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 OGFOD3Q6PK18 319 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 NPNTQ6UXI9 565 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 B4GALNT4Q76KP1 1039 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 B3GNT8Q7Z7M8 397 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 NRROSQ86YC3 692 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 SPACA3Q8IXA5 215 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 RNF25Q96BH1 459 aaPredicted RBP19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 HIC2Q96JB3 615 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 GFM1Q96RP9 751 aaKnown RBP19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 CEP41Q9BYV8 373 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 FOXP3Q9BZS1 431 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 LRRN3Q9H3W5 708 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 ASCL3Q9NQ33 180 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 SPATS2LQ9NUQ6 558 aaKnown RBP19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 TMEM98Q9Y2Y6 226 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 RNF215Q9Y6U7 377 aa19.01■□□□□ 0.63
TNFRSF1A-212ENST00000539372 A0A1W2PQM1 296 aa19■□□□□ 0.63
TNFRSF1A-212ENST00000539372 CLDN7O95471 211 aa19■□□□□ 0.63
TNFRSF1A-212ENST00000539372 SOD1P00441 154 aa19■□□□□ 0.63
TNFRSF1A-212ENST00000539372 MMP2P08253 660 aa19■□□□□ 0.63
TNFRSF1A-212ENST00000539372 ZNF30P17039 623 aa19■□□□□ 0.63
TNFRSF1A-212ENST00000539372 AK4P27144 223 aaPredicted RBP19■□□□□ 0.63
TNFRSF1A-212ENST00000539372 TEAD1P28347 426 aa19■□□□□ 0.63
TNFRSF1A-212ENST00000539372 RBMS1P29558 406 aaKnown RBP19■□□□□ 0.63
TNFRSF1A-212ENST00000539372 STC1P52823 247 aa19■□□□□ 0.63
TNFRSF1A-212ENST00000539372 DYNLT1P63172 113 aa19■□□□□ 0.63
TNFRSF1A-212ENST00000539372 C14orf28Q4W4Y0 310 aa19■□□□□ 0.63
TNFRSF1A-212ENST00000539372 CERCAMQ5T4B2 595 aa19■□□□□ 0.63
TNFRSF1A-212ENST00000539372 SLC9A4Q6AI14 798 aa19■□□□□ 0.63
TNFRSF1A-212ENST00000539372 TRIM74Q86UV6 250 aa19■□□□□ 0.63
TNFRSF1A-212ENST00000539372 RFX6Q8HWS3 928 aa19■□□□□ 0.63
TNFRSF1A-212ENST00000539372 CCNJLQ8IV13 435 aa19■□□□□ 0.63
TNFRSF1A-212ENST00000539372 CNTD1Q8N815 330 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms