RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 FAM169AQ9Y6X4 670 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 BAHCC1Q9P281 2608 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 LRRK1Q38SD2 2015 aa14.15□□□□□ -0.14
CD4-208ENST00000538827 CEP250Q9BV73 2442 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 ZCWPW2A0A1B0GU75 182 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 A0A1W2PP55 124 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 A0A1W2PQF6 199 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 TLDC2A0PJX2 215 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 MROH6A6NGR9 719 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 GOLGA8KD6RF30 607 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 GOLGA8TH3BQL2 631 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 NEMP1O14524 444 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 RNASEH2AO75792 299 aaKnown RBP14.14□□□□□ -0.15
CD4-208ENST00000538827 VAPBO95292 243 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 PAPSS2O95340 614 aaPredicted RBP14.14□□□□□ -0.15
CD4-208ENST00000538827 C5AR1P21730 350 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 LHCGRP22888 699 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 P2RY2P41231 377 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 EIF3BP55884 814 aaKnown RBP14.14□□□□□ -0.15
CD4-208ENST00000538827 ZNF844Q08AG5 666 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 MGAT5Q09328 741 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 CNTN1Q12860 1018 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 STAT4Q14765 748 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 SKIDA1Q1XH10 827 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 KBTBD12Q3ZCT8 623 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 TTC31Q49AM3 519 aaPredicted RBP14.14□□□□□ -0.15
CD4-208ENST00000538827 ALS2CLQ60I27 953 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 PDPK2PQ6A1A2 396 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 CRTC1Q6UUV9 634 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 LRIG3Q6UXM1 1119 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 DPPA4Q7L190 304 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 HDDC3Q8N4P3 179 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 OR13J1Q8NGT2 312 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 OR6P1Q8NGX9 317 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 HCAR2Q8TDS4 363 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 SCRN2Q96FV2 425 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 CYTH2Q99418 400 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 WRAP53Q9BUR4 548 aaKnown RBP14.14□□□□□ -0.15
CD4-208ENST00000538827 CENPHQ9H3R5 247 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 VIPAS39Q9H9C1 493 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 POLMQ9NP87 494 aaPredicted RBP14.14□□□□□ -0.15
CD4-208ENST00000538827 NLE1Q9NVX2 485 aaPredicted RBP14.14□□□□□ -0.15
CD4-208ENST00000538827 ZFATQ9P243 1243 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 BCCIPQ9P287 314 aaKnown RBP eCLIP14.14□□□□□ -0.15
CD4-208ENST00000538827 GGT7Q9UJ14 662 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 RABGEF1Q9UJ41 708 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 IKBKGQ9Y6K9 419 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 CHD6Q8TD26 2715 aa14.14□□□□□ -0.15
CD4-208ENST00000538827 PLXNA2O75051 1894 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 OR51F1A6NGY5 319 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 GOLGA6L10A6NI86 522 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 GOT2P00505 430 aaKnown RBP14.13□□□□□ -0.15
CD4-208ENST00000538827 F7P08709 466 aaPredicted RBP14.13□□□□□ -0.15
CD4-208ENST00000538827 C1SP09871 688 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 ELFN1P0C7U0 828 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 ACADMP11310 421 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 MMP12P39900 470 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 ARSDP51689 593 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 ELP6Q0PNE2 266 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 TMED2Q15363 201 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 AFTPHQ6ULP2 937 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 TMEM92Q6UXU6 159 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.13□□□□□ -0.15
CD4-208ENST00000538827 PTAR1Q7Z6K3 402 aaPredicted RBP14.13□□□□□ -0.15
CD4-208ENST00000538827 TMPRSS6Q8IU80 811 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 KIAA2013Q8IYS2 634 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 PGBD3Q8N328 593 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 AADATQ8N5Z0 425 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 GOLGA6L1Q8N7Z2 621 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 HMGB4Q8WW32 186 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 HDAC10Q969S8 669 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 SIPA1Q96FS4 1042 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 TBATAQ96M53 351 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 LYSMD1Q96S90 227 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 PAFAH2Q99487 392 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 OMDQ99983 421 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 FAM167BQ9BTA0 163 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 MKRN2Q9H000 416 aaKnown RBP14.13□□□□□ -0.15
CD4-208ENST00000538827 SMYD2Q9NRG4 433 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 PKD2L2Q9NZM6 624 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 PPIL1Q9Y3C6 166 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 ZFHX4Q86UP3 3567 aa14.13□□□□□ -0.15
CD4-208ENST00000538827 CCDC162PA2VCL2 907 aa14.12□□□□□ -0.15
CD4-208ENST00000538827 FAM159BA6NKW6 160 aa14.12□□□□□ -0.15
CD4-208ENST00000538827 CXorf49A8MYA2 514 aaPredicted RBP14.12□□□□□ -0.15
CD4-208ENST00000538827 MAP2K7O14733 419 aa14.12□□□□□ -0.15
CD4-208ENST00000538827 RASGRF2O14827 1237 aa14.12□□□□□ -0.15
CD4-208ENST00000538827 SPINT1O43278 529 aa14.12□□□□□ -0.15
CD4-208ENST00000538827 ALDH1A2O94788 518 aa14.12□□□□□ -0.15
CD4-208ENST00000538827 INHBAP08476 426 aa14.12□□□□□ -0.15
CD4-208ENST00000538827 NDUFV2P19404 249 aa14.12□□□□□ -0.15
CD4-208ENST00000538827 SDHBP21912 280 aa14.12□□□□□ -0.15
CD4-208ENST00000538827 MC4RP32245 332 aa14.12□□□□□ -0.15
CD4-208ENST00000538827 DRD3P35462 400 aa14.12□□□□□ -0.15
CD4-208ENST00000538827 SPAM1P38567 509 aa14.12□□□□□ -0.15
CD4-208ENST00000538827 HADHAP40939 763 aa14.12□□□□□ -0.15
CD4-208ENST00000538827 MSH2P43246 934 aa14.12□□□□□ -0.15
CD4-208ENST00000538827 RALGDSQ12967 914 aa14.12□□□□□ -0.15
CD4-208ENST00000538827 ACOX1Q15067 660 aa14.12□□□□□ -0.15
CD4-208ENST00000538827 ANGPT1Q15389 498 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms