RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 SCRN2Q96FV2 425 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 ARNT2Q9HBZ2 717 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 EURLQ9NYK6 297 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 VPS18Q9P253 973 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 SPO11Q9Y5K1 396 aa17.24■□□□□ 0.35
CLN6-202ENST00000538696 CUL9Q8IWT3 2517 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 A0A0U1RQS6 177 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 AP3B1O00203 1094 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 GALR2O43603 387 aaPredicted RBP17.23■□□□□ 0.35
CLN6-202ENST00000538696 AP1G1O43747 822 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 PIRTP0C851 137 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 LHCGRP22888 699 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 CD6P30203 668 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 OXTRP30559 389 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 VIPR1P32241 457 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 HNF1BP35680 557 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 CCDC15Q0P6D6 951 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 ELP6Q0PNE2 266 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 MSLNQ13421 630 aaPredicted RBP17.23■□□□□ 0.35
CLN6-202ENST00000538696 CRYMQ14894 314 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 TSPAN33Q86UF1 283 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 LONP2Q86WA8 852 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 OR14C36Q8NHC7 312 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 NELL1Q92832 810 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 ZNF669Q96BR6 464 aaPredicted RBP17.23■□□□□ 0.35
CLN6-202ENST00000538696 MRRFQ96E11 262 aaKnown RBP17.23■□□□□ 0.35
CLN6-202ENST00000538696 PGM2Q96G03 612 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 TOE1Q96GM8 510 aaKnown RBP17.23■□□□□ 0.35
CLN6-202ENST00000538696 FCRL3Q96P31 734 aaPredicted RBP17.23■□□□□ 0.35
CLN6-202ENST00000538696 LYSMD1Q96S90 227 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 NAT9Q9BTE0 207 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 IL22Q9GZX6 179 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 BTBD1Q9H0C5 482 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 SGK2Q9HBY8 427 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 SMYD2Q9NRG4 433 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 WSB2Q9NYS7 404 aaPredicted RBP17.23■□□□□ 0.35
CLN6-202ENST00000538696 SAMD15Q9P1V8 674 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 LGALS13Q9UHV8 139 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 MBD1Q9UIS9 605 aaPredicted RBP17.23■□□□□ 0.35
CLN6-202ENST00000538696 SOX13Q9UN79 622 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 NOVA2Q9UNW9 492 aaKnown RBP17.23■□□□□ 0.35
CLN6-202ENST00000538696 INVSQ9Y283 1065 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 TNRC6BQ9UPQ9 1833 aaKnown RBP17.23■□□□□ 0.35
CLN6-202ENST00000538696 THADAQ6YHU6 1953 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 SPAG17Q6Q759 2223 aa17.23■□□□□ 0.35
CLN6-202ENST00000538696 A8MX80 341 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 SP9P0CG40 484 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 CYP2A6P11509 494 aaPredicted RBP17.22■□□□□ 0.35
CLN6-202ENST00000538696 NUBP1P53384 320 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 TMED2Q15363 201 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 CDKN3Q16667 212 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 ZNF528Q3MIS6 628 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 KBTBD12Q3ZCT8 623 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 TMEM52BQ4KMG9 183 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 TNFAIP8L3Q5GJ75 292 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 SPANXN3Q5MJ09 141 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 CRTC1Q6UUV9 634 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 TDRPQ86YL5 185 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 CCNJLQ8IV13 435 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 UNC5BQ8IZJ1 945 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 CYP4X1Q8N118 509 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 NDUFAF2Q8N183 169 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 CYTH2Q99418 400 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 DHRS4Q9BTZ2 278 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 SLC24A2Q9UI40 661 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 ZNF711Q9Y462 761 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 ABCA7Q8IZY2 2146 aa17.22■□□□□ 0.35
CLN6-202ENST00000538696 FAM237BA0A1B0GVD1 139 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 FAM159BA6NKW6 160 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 CXorf49A8MYA2 514 aaPredicted RBP17.21■□□□□ 0.35
CLN6-202ENST00000538696 C10orf142B7Z368 130 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 DLL1O00548 723 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 SEMA4FO95754 770 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 BCKDHBP21953 392 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 NFKBIAP25963 317 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 GYS2P54840 703 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 PPP2CBP62714 309 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 PPP2CAP67775 309 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 CBX1P83916 185 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 POU6F1Q14863 301 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 SMAD1Q15797 465 aaKnown RBP17.21■□□□□ 0.35
CLN6-202ENST00000538696 CNGA3Q16281 694 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 USP39Q53GS9 565 aaKnown RBP17.21■□□□□ 0.35
CLN6-202ENST00000538696 RIBC1Q8N443 379 aaPredicted RBP17.21■□□□□ 0.35
CLN6-202ENST00000538696 OR2T34Q8NGX1 318 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 BLOC1S5Q8TDH9 187 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 SPACA7Q96KW9 195 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 PAFAH2Q99487 392 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 WRAP53Q9BUR4 548 aaKnown RBP17.21■□□□□ 0.35
CLN6-202ENST00000538696 FAM126AQ9BYI3 521 aaPredicted RBP17.21■□□□□ 0.35
CLN6-202ENST00000538696 MAGEE1Q9HCI5 957 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 PREBQ9HCU5 417 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 MOCS1Q9NZB8 636 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 FETUBQ9UGM5 382 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 TCAF1Q9Y4C2 921 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 RPS6KL1Q9Y6S9 549 aa17.21■□□□□ 0.35
CLN6-202ENST00000538696 CCDC78A2IDD5 438 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 PRR23AA6NEV1 266 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 FOXO6A8MYZ6 492 aa17.21■□□□□ 0.34
CLN6-202ENST00000538696 NEMP1O14524 444 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms