RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 ARHGEF38Q9NXL2 777 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 DONSONQ9NYP3 566 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 GTSE1Q9NYZ3 720 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 OR12D3Q9UGF7 316 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 PCSK1NQ9UHG2 260 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 MUTYHQ9UIF7 546 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 CDC23Q9UJX2 597 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 RAB21Q9UL25 225 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 DUSP12Q9UNI6 340 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 TFR2Q9UP52 801 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 MRPS17Q9Y2R5 130 aaKnown RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 REXO2Q9Y3B8 237 aaKnown RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 PIAS3Q9Y6X2 628 aa4.41□□□□□ -1.7
SNHG1-208ENST00000538266 LAMA2P24043 3122 aaKnown RBP4.41□□□□□ -1.7
SNHG1-208ENST00000538266 TICRRQ7Z2Z1 1910 aa4.4□□□□□ -1.7
SNHG1-208ENST00000538266 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 A0A1B0GVM2 712 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 LRRD1A4D1F6 860 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 CTAGE15A4D2H0 777 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 C9orf118A6NHY6 69 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 E9PAM4 449 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 SPECC1L-ADORA2AF8WAN1 911 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 H0Y626 953 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 H3BQF6 201 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 TRDMT1O14717 391 aaKnown RBP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 MAP2K7O14733 419 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 PJA2O43164 708 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 HOXC11O43248 304 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 DAPK3O43293 454 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 PSTPIP1O43586 416 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 DCXO43602 365 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 NARSO43776 548 aaKnown RBP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 CREB3O43889 395 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 CACNG3O60359 315 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 BRINP1O60477 761 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 TSPAN3O60637 253 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 TBL1XO60907 577 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 SRGAP2O75044 1071 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 KLHL18O94889 574 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 ENDOD1O94919 500 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 APOL3O95236 402 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 MOCS3O95396 460 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 CTAGE8P0CG41 777 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 ALADP13716 330 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 TYRP14679 529 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 GLULP15104 373 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 TACR2P21452 398 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 COMTP21964 271 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 APEX1P27695 318 aaKnown RBP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 EPHB2P29323 1055 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 SLC6A4P31645 630 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 HTR7P34969 479 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 ADCY8P40145 1251 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 CETN2P41208 172 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 LMAN1P49257 510 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 ZNF135P52742 658 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 ATXN1P54253 815 aaKnown RBP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 TPI1P60174 286 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 RPS24P62847 133 aaKnown RBP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 ROM1Q03395 351 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 GAD2Q05329 585 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 SCAPQ12770 1279 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 GRSF1Q12849 480 aaKnown RBP eCLIP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 ZNF177Q13360 481 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 KRT81Q14533 505 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 MLF2Q15773 248 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 SMTNL2Q2TAL5 461 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 MAP9Q49MG5 647 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 SLC44A4Q53GD3 710 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 BOLA3Q53S33 107 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 HSP90B2PQ58FF3 399 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 FAM133BQ5BKY9 247 aaKnown RBP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 PPP6R3Q5H9R7 873 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 MPP7Q5T2T1 576 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 LRRC38Q5VT99 294 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 PRAMEF9Q5VWM5 478 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 DAB2IPQ5VWQ8 1189 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 RAP1GAP2Q684P5 730 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 NADSYN1Q6IA69 706 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 RWDD4Q6NW29 188 aaKnown RBP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 ESRP1Q6NXG1 681 aaKnown RBP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 FBXL22Q6P050 247 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 ZNF852Q6ZMS4 543 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 TPRG1Q6ZUI0 275 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 PEX26Q7Z412 305 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 BNIPLQ7Z465 357 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 POLNQ7Z5Q5 900 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 CTAGE6Q86UF2 777 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 RALGPS2Q86X27 583 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 TMEM25Q86YD3 366 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 PHYKPLQ8IUZ5 450 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 CCDC50Q8IVM0 306 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 MFN1Q8IWA4 741 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 MAP7D3Q8IWC1 876 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 SUGP1Q8IWZ8 645 aaKnown RBP4.4□□□□□ -1.71
SNHG1-208ENST00000538266 CTAGE4Q8IX94 777 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 RHOT1Q8IXI2 618 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 FAM217AQ8IXS0 508 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 CFAP52Q8N1V2 620 aa4.4□□□□□ -1.71
SNHG1-208ENST00000538266 RNF10Q8N5U6 811 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms