RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 FGD2Q7Z6J4 655 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 KRT73Q86Y46 540 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 ADGRG2Q8IZP9 1017 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 EID3Q8N140 333 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 RNF145Q96MT1 663 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 MRPL57Q9BQC6 102 aaKnown RBP5.36□□□□□ -1.55
LRP6-203ENST00000538239 BCO2Q9BYV7 579 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 GGA2Q9UJY4 613 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 CA14Q9ULX7 337 aa5.36□□□□□ -1.55
LRP6-203ENST00000538239 LRRC10BA6NIK2 292 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 ATP5F1P24539 256 aaPredicted RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 STX4Q12846 297 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 LRRC32Q14392 662 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 FAM187BQ17R55 369 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 MINDY4Q4G0A6 757 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 OTUD3Q5T2D3 398 aaPredicted RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 ZNF544Q6NX49 715 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 SLC26A9Q7LBE3 791 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 HOMEZQ8IX15 550 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 WFIKKN2Q8TEU8 576 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 GMLQ99445 158 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 AIF1LQ9BQI0 150 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 MCMBPQ9BTE3 642 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 ACSS2Q9NR19 701 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 PCYOX1Q9UHG3 505 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 TLR6Q9Y2C9 796 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 POLR3HQ9Y535 204 aaPredicted RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 C10orf71Q711Q0 1435 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 CACNA1FO60840 1977 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 BTNL10A8MVZ5 291 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 FAM20BO75063 409 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 MT-CYBP00156 380 aaPredicted RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 F2P00734 622 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 CHRNA1P02708 482 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 KCNA3P22001 575 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 KCNA5P22460 613 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 ALDH4A1P30038 563 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 MRPS15P82914 257 aaKnown RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 PHF19Q5T6S3 580 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 TXNDC11Q6PKC3 985 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 POTEHQ6S545 545 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 SERPINA9Q86WD7 417 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 DHFR2Q86XF0 187 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 EPHX4Q8IUS5 362 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 C12orf76Q8N812 135 aaPredicted RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 BPIFB1Q8TDL5 484 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 ACTRT2Q8TDY3 377 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 STYXQ8WUJ0 223 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 PTPN18Q99952 460 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 SRMSQ9H3Y6 488 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 RIBC2Q9H4K1 309 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 POLR3BQ9NW08 1133 aaPredicted RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 DNAJB4Q9UDY4 337 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 VWA7Q9Y334 891 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 MTF2Q9Y483 593 aaPredicted RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 LYVE1Q9Y5Y7 322 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 A8MU76 341 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 ATG7O95352 703 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 ITPKBP27987 946 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 LRPAP1P30533 357 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 CSNK2BP67870 215 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 NFATC2Q13469 925 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 FRG1Q14331 258 aaKnown RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 PLEKHA7Q6IQ23 1121 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 ESRP1Q6NXG1 681 aaKnown RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 MICU2Q8IYU8 434 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 PRELID2Q8N945 189 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 FBXO30Q8TB52 745 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 ZNF516Q92618 1163 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 FUBP3Q96I24 572 aaKnown RBP eCLIP5.35□□□□□ -1.556e-11■■■■■ 37.8
LRP6-203ENST00000538239 TEPSINQ96N21 525 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 SLC9A7Q96T83 725 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 OR2AG1Q9H205 316 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 ST6GALNAC4Q9H4F1 302 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 LRRC19Q9H756 370 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 INSL5Q9Y5Q6 135 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 ARL5AQ9Y689 179 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 GRIN2DO15399 1336 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 MATN3O15232 486 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 SCN2BO60939 215 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 LRCH4O75427 683 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 GOT2P00505 430 aaKnown RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 ALADP13716 330 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 ATP6V1B1P15313 513 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 NUP107P57740 925 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 YBEYP58557 167 aaPredicted RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 DSG1Q02413 1049 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 MSANTD2Q6P1R3 559 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 MACC1Q6ZN28 852 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 LRRC74BQ6ZQY2 392 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 RASGRP3Q8IV61 690 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 AHI1Q8N157 1196 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 PCDH20Q8N6Y1 951 aaKnown RBP5.35□□□□□ -1.55
LRP6-203ENST00000538239 ATP6V1C2Q8NEY4 427 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 ITFG1Q8TB96 612 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 SIPA1Q96FS4 1042 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 C12orf66Q96MD2 445 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 QKIQ96PU8 341 aaKnown RBP eCLIP5.35□□□□□ -1.554e-7■■■■■ 28.2
LRP6-203ENST00000538239 ATG10Q9H0Y0 220 aa5.35□□□□□ -1.55
LRP6-203ENST00000538239 CHRAC1Q9NRG0 131 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms