RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 SLC9A6Q92581 669 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 DNAJC19Q96DA6 116 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 NPAS2Q99743 824 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 CLN6Q9NWW5 311 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 CLDND1Q9NY35 253 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 EGFL7Q9UHF1 273 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 ATG13O75143 517 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 NFATC1O95644 943 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 CCNE2O96020 404 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 OTCP00480 354 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 SNRPB2P08579 225 aaKnown RBP11.19□□□□□ -0.62
LINC00346-201ENST00000538077 CDC42P60953 191 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 SULT2A1Q06520 285 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 SLC20A2Q08357 652 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 PTPN20Q4JDL3 420 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 HID1Q8IV36 788 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 ENKURQ8TC29 256 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 PHF10Q8WUB8 498 aaKnown RBP11.19□□□□□ -0.62
LINC00346-201ENST00000538077 P2RY11Q96G91 374 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 EBPLQ9BY08 206 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 PTGFRNQ9P2B2 879 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 ZMYM2Q9UBW7 1377 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 PTCH2Q9Y6C5 1203 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 PSMD9O00233 223 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 ZBTB11O95625 1053 aaPredicted RBP11.19□□□□□ -0.62
LINC00346-201ENST00000538077 CST1P01037 141 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 COX4I1P13073 169 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 GNPDA1P46926 289 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 CACNA2D1P54289 1103 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 SAMD4BQ5PRF9 694 aaKnown RBP11.19□□□□□ -0.62
LINC00346-201ENST00000538077 C9orf64Q5T6V5 341 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 TMC5Q6UXY8 1006 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 HIPK1Q86Z02 1210 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 UPF1Q92900 1129 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC00346-201ENST00000538077 EXOSC8Q96B26 276 aaKnown RBP11.19□□□□□ -0.62
LINC00346-201ENST00000538077 ZNF670Q9BS34 389 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 PNPOQ9NVS9 261 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 MAP4K5Q9Y4K4 846 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 CST3P01034 146 aaPredicted RBP11.19□□□□□ -0.62
LINC00346-201ENST00000538077 CDH3P22223 829 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 FKBP1BP68106 108 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 TTMPQ5BVD1 217 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 ARHGAP36Q6ZRI8 547 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 HPS6Q86YV9 775 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 NPAS4Q8IUM7 802 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 MCEMP1Q8IX19 187 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 DCBLD1Q8N8Z6 715 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 ZNF248Q8NDW4 579 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 ZNF398Q8TD17 642 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 SMPDL3BQ92485 455 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 C9orf16Q9BUW7 83 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 CXorf56Q9H5V9 222 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 EHD3Q9NZN3 535 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 TMCO1Q9UM00 188 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 RFXANKO14593 260 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 TCEA3O75764 348 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 UGT2B15P54855 530 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 TRMT5Q32P41 509 aaKnown RBP11.19□□□□□ -0.62
LINC00346-201ENST00000538077 TMEM63BQ5T3F8 832 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 GALNT5Q7Z7M9 940 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 CREG2Q8IUH2 290 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 ADHFE1Q8IWW8 467 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 HDDC3Q8N4P3 179 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 TERB1Q8NA31 727 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 METTL21AQ8WXB1 218 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 MRPL57Q9BQC6 102 aaKnown RBP11.19□□□□□ -0.62
LINC00346-201ENST00000538077 CNPPD1Q9BV87 410 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 OSBPL2Q9H1P3 480 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 CRISPLD1Q9H336 500 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 GTF2IRD1Q9UHL9 959 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 EFR3BQ9Y2G0 817 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 SH3GLB1Q9Y371 365 aa11.19□□□□□ -0.62
LINC00346-201ENST00000538077 COL1A2P08123 1366 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 CARNS1A5YM72 827 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 ITGAVP06756 1048 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 ATP5F1P24539 256 aaPredicted RBP11.18□□□□□ -0.62
LINC00346-201ENST00000538077 CCND3P30281 292 aaPredicted RBP11.18□□□□□ -0.62
LINC00346-201ENST00000538077 PGDP52209 483 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 GRSF1Q12849 480 aaKnown RBP eCLIP11.18□□□□□ -0.62
LINC00346-201ENST00000538077 INO80DQ53TQ3 878 aaPredicted RBP11.18□□□□□ -0.62
LINC00346-201ENST00000538077 INTS6LQ5JSJ4 861 aaKnown RBP11.18□□□□□ -0.62
LINC00346-201ENST00000538077 DHRSXQ8N5I4 330 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 SETD9Q8NE22 299 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 HERVK_113Q902F9 699 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 DNASE1L2Q92874 299 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 GTPBP2Q9BX10 602 aaKnown RBP11.18□□□□□ -0.62
LINC00346-201ENST00000538077 LMAN2LQ9H0V9 348 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 EPB41L1Q9H4G0 881 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 SLC38A8A6NNN8 435 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 MASP1P48740 699 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 ZNF135P52742 658 aaPredicted RBP11.18□□□□□ -0.62
LINC00346-201ENST00000538077 CASP9P55211 416 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 ARF5P84085 180 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 SLC34A1Q06495 639 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 PHF13Q86YI8 300 aaPredicted RBP11.18□□□□□ -0.62
LINC00346-201ENST00000538077 C8orf59Q8N0T1 100 aaPredicted RBP11.18□□□□□ -0.62
LINC00346-201ENST00000538077 SIDT2Q8NBJ9 832 aaKnown RBP11.18□□□□□ -0.62
LINC00346-201ENST00000538077 OR7D4Q8NG98 312 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 TEX47Q8TBZ9 253 aa11.18□□□□□ -0.62
LINC00346-201ENST00000538077 HMGB4Q8WW32 186 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms