RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 HLA-DQB2P05538 268 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 FGF4P08620 206 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 INHBBP09529 407 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 USP17L7P0C7H9 530 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 IDO1P14902 403 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 PORP16435 677 aaPredicted RBP12.15□□□□□ -0.46
CPSF7-218ENST00000537641 RFC2P35250 354 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 HLCSP50747 726 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 SLC5A3P53794 718 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 CBX3Q13185 183 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 RAB39AQ14964 217 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 PDCD4Q53EL6 469 aaKnown RBP12.15□□□□□ -0.46
CPSF7-218ENST00000537641 SLC44A4Q53GD3 710 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 KIAA0319Q5VV43 1072 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 WSCD1Q658N2 575 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 ZNF280DQ6N043 979 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 BEND5Q7L4P6 421 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 GPRIN1Q7Z2K8 1008 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 PTRH1Q86Y79 214 aaKnown RBP12.15□□□□□ -0.46
CPSF7-218ENST00000537641 RNF135Q8IUD6 432 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 PHYKPLQ8IUZ5 450 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 CMTR2Q8IYT2 770 aaKnown RBP12.15□□□□□ -0.46
CPSF7-218ENST00000537641 TBC1D21Q8IYX1 336 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 TMEM86AQ8N2M4 240 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 SMG8Q8ND04 991 aaKnown RBP12.15□□□□□ -0.46
CPSF7-218ENST00000537641 ZMIZ2Q8NF64 920 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 PHF21BQ96EK2 531 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 MRGPRX2Q96LB1 330 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 SLC39A3Q9BRY0 314 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 DCUN1D5Q9BTE7 237 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 TRIM62Q9BVG3 475 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 SEZ6LQ9BYH1 1024 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 CATSPERBQ9H7T0 1116 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 AKTIPQ9H8T0 292 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 ARNT2Q9HBZ2 717 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 INTS10Q9NVR2 710 aaKnown RBP12.15□□□□□ -0.46
CPSF7-218ENST00000537641 PKD2L2Q9NZM6 624 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 GNPTGQ9UJJ9 305 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 NUP205Q92621 2012 aa12.15□□□□□ -0.46
CPSF7-218ENST00000537641 PATJQ8NI35 1801 aa12.15□□□□□ -0.47
CPSF7-218ENST00000537641 TYW5A2RUC4 315 aaKnown RBP12.14□□□□□ -0.47
CPSF7-218ENST00000537641 HHLA1C9JL84 531 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 VPS4BO75351 444 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 SUPT7LO94864 414 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 GNAO1P09471 354 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 JUNBP17275 347 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-218ENST00000537641 HOXB8P17481 243 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-218ENST00000537641 CAPN3P20807 821 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 VARSP26640 1264 aaKnown RBP12.14□□□□□ -0.47
CPSF7-218ENST00000537641 LHX1P48742 406 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 PLK1P53350 603 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 C21orf59P57076 290 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 HERVK_113P63132 956 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 PHEXP78562 749 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 BEX3Q00994 111 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 PMS2P3Q13401 168 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 CCL14Q16627 93 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 MOGQ16653 247 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 UGT3A2Q3SY77 523 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 PITRM1Q5JRX3 1037 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 AARS2Q5JTZ9 985 aaKnown RBP12.14□□□□□ -0.47
CPSF7-218ENST00000537641 BRMS1LQ5PSV4 323 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 CLEC6AQ6EIG7 209 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 KDELC1Q6UW63 502 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 ARHGAP36Q6ZRI8 547 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 USP51Q70EK9 711 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 RAB44Q7Z6P3 723 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-218ENST00000537641 SPPL2CQ8IUH8 684 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 LRRC49Q8IUZ0 686 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 DDHD1Q8NEL9 900 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 FAM110BQ8TC76 370 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 OSCP1Q8WVF1 389 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 ERVK-6Q9BXR3 956 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 POLR1BQ9H9Y6 1135 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 FBRSL1Q9HCM7 1045 aaKnown RBP12.14□□□□□ -0.47
CPSF7-218ENST00000537641 CMTM6Q9NX76 183 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 GMPR2Q9P2T1 348 aaKnown RBP12.14□□□□□ -0.47
CPSF7-218ENST00000537641 PCDHA9Q9Y5H5 950 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 CROCCQ5TZA2 2017 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 ANKRD36A6QL64 1941 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 TCRBV5S2A0A599 114 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 H0YAE9 185 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 AURKAO14965 403 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 AZIN1O14977 448 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 SLC7A4O43246 635 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 COQ9O75208 318 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 BAIAP3O94812 1187 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 ESRRBO95718 433 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 IGLV3-25P01717 112 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 LBPP18428 481 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 SLC6A2P23975 617 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 PURAQ00577 322 aaKnown RBP12.14□□□□□ -0.47
CPSF7-218ENST00000537641 GRIK2Q13002 908 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 TAF1CQ15572 869 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-218ENST00000537641 FSCN1Q16658 493 aaKnown RBP12.14□□□□□ -0.47
CPSF7-218ENST00000537641 CCNYL2Q5T2Q4 361 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 MANEALQ5VSG8 457 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 GPR107Q5VW38 600 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 KANK2Q63ZY3 851 aa12.14□□□□□ -0.47
CPSF7-218ENST00000537641 TWF2Q6IBS0 349 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms