RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 AP2B1P63010 937 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 HERVK_113P63132 956 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 SLC34A1Q06495 639 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 PDCD2Q16342 344 aaPredicted RBP13.56□□□□□ -0.24
SMG6-203ENST00000536871 KHDC1Q4VXA5 237 aaKnown RBP13.56□□□□□ -0.24
SMG6-203ENST00000536871 ACSBG2Q5FVE4 666 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 C1orf146Q5VVC0 180 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 TMEM150AQ86TG1 271 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 RNF135Q8IUD6 432 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 PPFIBP2Q8ND30 876 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 LPCAT1Q8NF37 534 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 OR4K2Q8NGD2 314 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 MAPK15Q8TD08 544 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 LPGAT1Q92604 370 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 ERVK-6Q9BXR3 956 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 NUF2Q9BZD4 464 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 IL21Q9HBE4 155 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 MRPL40Q9NQ50 206 aaKnown RBP13.56□□□□□ -0.24
SMG6-203ENST00000536871 PFDN4Q9NQP4 134 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 DNMT3BQ9UBC3 853 aaKnown RBP13.56□□□□□ -0.24
SMG6-203ENST00000536871 CRYL1Q9Y2S2 319 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 SH3BP1Q9Y3L3 701 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 PKP3Q9Y446 797 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 COL4A6Q14031 1691 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 SCN5AQ14524 2016 aa13.56□□□□□ -0.24
SMG6-203ENST00000536871 LTBP2Q14767 1821 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 SOBPA7XYQ1 873 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 TEX28O15482 410 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 KERAO60938 352 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 SOCS5O75159 536 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 RHOBTB1O94844 696 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 MYCP01106 439 aaPredicted RBP13.55□□□□□ -0.24
SMG6-203ENST00000536871 ADH1AP07327 375 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 FGF4P08620 206 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 SP100P23497 879 aaPredicted RBP13.55□□□□□ -0.24
SMG6-203ENST00000536871 RGRP47804 291 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 CYLC2Q14093 348 aaPredicted RBP13.55□□□□□ -0.24
SMG6-203ENST00000536871 GPR158Q5T848 1215 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 TXNDC11Q6PKC3 985 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 C16orf59Q7L2K0 433 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 CUZD1Q86UP6 607 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 KIAA1191Q96A73 305 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 VWCEQ96DN2 955 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 OR52B2Q96RD2 323 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 ZBP1Q9H171 429 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 ZNF385DQ9H6B1 395 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 C11orf49Q9H6J7 331 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 SUDS3Q9H7L9 328 aaPredicted RBP13.55□□□□□ -0.24
SMG6-203ENST00000536871 MEAF6Q9HAF1 191 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 GTSE1Q9NYZ3 720 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 KIAA1522Q9P206 1035 aaPredicted RBP13.55□□□□□ -0.24
SMG6-203ENST00000536871 LHX3Q9UBR4 397 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 SLC7A8Q9UHI5 535 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 LRRC42Q9Y546 428 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 OR51B4Q9Y5P0 310 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 CPQQ9Y646 472 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 TRAV19A0A0A6YYK7 116 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 OR51F1A6NGY5 319 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 FZD6O60353 706 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 SRP72O76094 671 aaKnown RBP13.55□□□□□ -0.24
SMG6-203ENST00000536871 ESR1P03372 595 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 CYBBP04839 570 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 HSPA1AP0DMV8 641 aaKnown RBP13.55□□□□□ -0.24
SMG6-203ENST00000536871 HSPA1BP0DMV9 641 aaKnown RBP13.55□□□□□ -0.24
SMG6-203ENST00000536871 DDX6P26196 483 aaKnown RBP eCLIP13.55□□□□□ -0.24
SMG6-203ENST00000536871 PIK3R1P27986 724 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 VHLP40337 213 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 PTGER3P43115 390 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 SGSHP51688 502 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 EPHB1P54762 984 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 PTPN5P54829 565 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 CDC16Q13042 620 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 ZNF678Q5SXM1 525 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 ARMC12Q5T9G4 340 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 LYPLAL1Q5VWZ2 237 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 ZNF549Q6P9A3 640 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 PGM2L1Q6PCE3 622 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 EFL1Q7Z2Z2 1120 aaKnown RBP13.55□□□□□ -0.24
SMG6-203ENST00000536871 MDGA1Q8NFP4 955 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 ANKRD49Q8WVL7 239 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 ALG9Q9H6U8 611 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 ZBTB26Q9HCK0 441 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 SMPD4Q9NXE4 827 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 PCDHB1Q9Y5F3 818 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 SPO11Q9Y5K1 396 aa13.55□□□□□ -0.24
SMG6-203ENST00000536871 A0A088AWK7 358 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 ZBTB14O43829 449 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 GREM1O60565 184 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 PKMP14618 531 aaKnown RBP13.54□□□□□ -0.24
SMG6-203ENST00000536871 RAG1P15918 1043 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 GABRR2P28476 465 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 HMGCLP35914 325 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 ATP4BP51164 291 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 PLK1P53350 603 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 CACNG1Q06432 222 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 SULT2A1Q06520 285 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 CUL3Q13618 768 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 RCN1Q15293 331 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 NXNQ6DKJ4 435 aa13.54□□□□□ -0.24
SMG6-203ENST00000536871 ADGRG6Q86SQ4 1221 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms