RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 I6L893 689 aaPredicted RBP5.48□□□□□ -1.53
PRKDC-208ENST00000536710 OGG1O15527 345 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 ADAM20O43506 726 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 ACTN1P12814 892 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 ARSBP15848 533 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 IL11P20809 199 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 GPTP24298 496 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 EIF2S3P41091 472 aaKnown RBP5.48□□□□□ -1.53
PRKDC-208ENST00000536710 METAP2P50579 478 aaKnown RBP eCLIP5.48□□□□□ -1.53
PRKDC-208ENST00000536710 RASSF2P50749 326 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 HSD17B4P51659 736 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 STAT2P52630 851 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 TAS2R40P59535 323 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 ZP1P60852 638 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 ST3GAL1Q11201 340 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 GGNBP1Q5YKI7 109 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 PMS2CLQ68D20 193 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 ANKRD54Q6NXT1 300 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 Q6ZSV7 163 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 MTSS1LQ765P7 747 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 DPPA4Q7L190 304 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 KRT74Q7RTS7 529 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 KBTBD6Q86V97 674 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 DNAAF5Q86Y56 855 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 DSELQ8IZU8 1212 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 SPATA6LQ8N4H0 392 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 IL17RCQ8NAC3 791 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 AVL9Q8NBF6 648 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 DENND1AQ8TEH3 1009 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 NSMCE1Q8WV22 266 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 NUDCD1Q96RS6 583 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 ABHD1Q96SE0 405 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 ACOX2Q99424 681 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 PAFAH2Q99487 392 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 C1QTNF1Q9BXJ1 281 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 FOXP1Q9H334 677 aaPredicted RBP5.48□□□□□ -1.53
PRKDC-208ENST00000536710 CLK4Q9HAZ1 481 aaKnown RBP5.48□□□□□ -1.53
PRKDC-208ENST00000536710 TAB2Q9NYJ8 693 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 MORF4L1Q9UBU8 362 aa5.48□□□□□ -1.53
PRKDC-208ENST00000536710 CFDP1Q9UEE9 299 aaPredicted RBP5.48□□□□□ -1.53
PRKDC-208ENST00000536710 SEC63Q9UGP8 760 aaKnown RBP5.48□□□□□ -1.53
PRKDC-208ENST00000536710 OR2A25A4D2G3 310 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 ATP2A1O14983 1001 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 FTCDO95954 541 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 HIST1H2ABP04908 130 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 APOA4P06727 396 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 HIST1H2ADP20671 130 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 ABCG1P45844 678 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 MRPS5P82675 430 aaKnown RBP5.47□□□□□ -1.53
PRKDC-208ENST00000536710 MRPS34P82930 218 aaKnown RBP5.47□□□□□ -1.53
PRKDC-208ENST00000536710 KCNC3Q14003 757 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 PCLAFQ15004 111 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 EIF2S3LQ2VIR3 472 aaKnown RBP5.47□□□□□ -1.53
PRKDC-208ENST00000536710 IGSF11Q5DX21 431 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 OTUD1Q5VV17 481 aaPredicted RBP5.47□□□□□ -1.53
PRKDC-208ENST00000536710 GARNL3Q5VVW2 1013 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 TMEM198Q66K66 360 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 METTL2BQ6P1Q9 378 aaKnown RBP5.47□□□□□ -1.53
PRKDC-208ENST00000536710 PDXDC1Q6P996 788 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 SYCE2Q6PIF2 218 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 B3GNT6Q6ZMB0 384 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 HIST3H2AQ7L7L0 130 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 MRPL10Q7Z7H8 261 aaKnown RBP5.47□□□□□ -1.53
PRKDC-208ENST00000536710 METTL2AQ96IZ6 378 aaKnown RBP5.47□□□□□ -1.53
PRKDC-208ENST00000536710 RADILQ96JH8 1075 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 CNDP2Q96KP4 475 aaKnown RBP5.47□□□□□ -1.53
PRKDC-208ENST00000536710 PPP1R13BQ96KQ4 1090 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 GCNAQ96QF7 691 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 SPRTNQ9H040 489 aaPredicted RBP5.47□□□□□ -1.53
PRKDC-208ENST00000536710 SIL1Q9H173 461 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 OSGEPL1Q9H4B0 414 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 ESRP2Q9H6T0 727 aaKnown RBP5.47□□□□□ -1.53
PRKDC-208ENST00000536710 PPP1R3EQ9H7J1 279 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 SLC35C2Q9NQQ7 365 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.47□□□□□ -1.53
PRKDC-208ENST00000536710 TTC7AQ9ULT0 858 aaPredicted RBP5.47□□□□□ -1.53
PRKDC-208ENST00000536710 PPIEQ9UNP9 301 aaKnown RBP5.47□□□□□ -1.53
PRKDC-208ENST00000536710 FRMD4BQ9Y2L6 1034 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 ARHGEF17Q96PE2 2063 aaPredicted RBP5.47□□□□□ -1.53
PRKDC-208ENST00000536710 ZNF804BA4D1E1 1349 aa5.47□□□□□ -1.53
PRKDC-208ENST00000536710 SETD1BQ9UPS6 1966 aaKnown RBP5.46□□□□□ -1.54
PRKDC-208ENST00000536710 RPS10-NUDT3A0A1W2PQS6 291 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 DKC1O60832 514 aaKnown RBP eCLIP5.46□□□□□ -1.54
PRKDC-208ENST00000536710 MITFO75030 526 aaPredicted RBP5.46□□□□□ -1.54
PRKDC-208ENST00000536710 NAGAP17050 411 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 GNLYP22749 145 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 RPL3P39023 403 aaKnown RBP5.46□□□□□ -1.54
PRKDC-208ENST00000536710 PLCD1P51178 756 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 UBXN2AP68543 259 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 GRSF1Q12849 480 aaKnown RBP eCLIP5.46□□□□□ -1.54
PRKDC-208ENST00000536710 CDC16Q13042 620 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 CTTNQ14247 550 aaKnown RBP5.46□□□□□ -1.54
PRKDC-208ENST00000536710 SMN1Q16637 294 aaKnown RBP5.46□□□□□ -1.54
PRKDC-208ENST00000536710 PNLIPRP3Q17RR3 467 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 ODF3L2Q3SX64 289 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 SOWAHCQ53LP3 525 aaPredicted RBP5.46□□□□□ -1.54
PRKDC-208ENST00000536710 FAM133BQ5BKY9 247 aaKnown RBP5.46□□□□□ -1.54
PRKDC-208ENST00000536710 PLEKHA7Q6IQ23 1121 aa5.46□□□□□ -1.54
PRKDC-208ENST00000536710 COLCA1Q6ZS62 124 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms