RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 KLQ9UEF7 1012 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 NEUROG3Q9Y4Z2 214 aa13.15□□□□□ -0.3
PRKDC-206ENST00000536429 MAP1BP46821 2468 aaKnown RBP13.15□□□□□ -0.3
PRKDC-206ENST00000536429 FAM221BA6H8Z2 402 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 GOLGA6CA6NDK9 693 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 GOLGA6BA6NDN3 693 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 ANKRD66B4E2M5 251 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 H7C0C1 242 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 CACNB4O00305 520 aaPredicted RBP13.14□□□□□ -0.31
PRKDC-206ENST00000536429 YY2O15391 372 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 ARHGAP6O43182 974 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 PMPCBO75439 489 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 RFPL3O75679 317 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 FUCA1P04066 466 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 GOLGA6DP0CG33 693 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 CA4P22748 312 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 HTR1BP28222 390 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 ATP5OP48047 213 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 HK3P52790 923 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 RPL26P61254 145 aaKnown RBP13.14□□□□□ -0.31
PRKDC-206ENST00000536429 CCZ1BP86790 482 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 CCZ1P86791 482 aaPredicted RBP13.14□□□□□ -0.31
PRKDC-206ENST00000536429 CCDC181Q5TID7 509 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 RAET1GQ6H3X3 334 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 KDELC1Q6UW63 502 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 TMPRSS7Q7RTY8 843 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 LRRC8AQ8IWT6 810 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 NDUFAF2Q8N183 169 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 OR56A4Q8NGH8 313 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 BTN2A2Q8WVV5 523 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 HTR3CQ8WXA8 447 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 OXNAD1Q96HP4 312 aaPredicted RBP13.14□□□□□ -0.31
PRKDC-206ENST00000536429 WDR24Q96S15 920 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 LYSMD1Q96S90 227 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 GORASP1Q9BQQ3 440 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 SLC13A1Q9BZW2 595 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 GOLGA6AQ9NYA3 693 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 KLHL8Q9P2G9 620 aaPredicted RBP13.14□□□□□ -0.31
PRKDC-206ENST00000536429 SPASTQ9UBP0 616 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 GUCA1BQ9UMX6 200 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 RPL26L1Q9UNX3 145 aaKnown RBP13.14□□□□□ -0.31
PRKDC-206ENST00000536429 PCDHGA1Q9Y5H4 931 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 CSNK1G3Q9Y6M4 447 aa13.14□□□□□ -0.31
PRKDC-206ENST00000536429 GOLGA4Q13439 2230 aaKnown RBP13.14□□□□□ -0.31
PRKDC-206ENST00000536429 TDRD6O60522 2096 aaKnown RBP13.14□□□□□ -0.31
PRKDC-206ENST00000536429 COL5A1P20908 1838 aaPredicted RBP13.13□□□□□ -0.31
PRKDC-206ENST00000536429 C1orf232A0A0U1RR37 186 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 TCRBV7S2A1N4TA0A589 114 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 NEMP2A6NFY4 417 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 HACD1B0YJ81 288 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 LMO7DNF2Z398 122 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 CASC3O15234 703 aaKnown RBP13.13□□□□□ -0.31
PRKDC-206ENST00000536429 RASGRP1O95267 797 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 HOXC4P09017 264 aaPredicted RBP13.13□□□□□ -0.31
PRKDC-206ENST00000536429 ALPPL2P10696 532 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 CKMT1AP12532 417 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 ZNF30P17039 623 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 ACP1P24666 158 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 NFKBIAP25963 317 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 POLD2P49005 469 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 DAB2P98082 770 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 CDK3Q00526 305 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 CDK18Q07002 472 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 SMAD1Q15797 465 aaKnown RBP13.13□□□□□ -0.31
PRKDC-206ENST00000536429 CCNI2Q6ZMN8 369 aaPredicted RBP13.13□□□□□ -0.31
PRKDC-206ENST00000536429 PID1Q7Z2X4 250 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 LYSMD3Q7Z3D4 306 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 TRIM74Q86UV6 250 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 SFTPA2Q8IWL1 248 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 SYCE1Q8N0S2 351 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 CCL4L1Q8NHW4 92 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 AP2M1Q96CW1 435 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 HES6Q96HZ4 224 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 MLPHQ9BV36 600 aaPredicted RBP13.13□□□□□ -0.31
PRKDC-206ENST00000536429 RIOK2Q9BVS4 552 aaKnown RBP13.13□□□□□ -0.31
PRKDC-206ENST00000536429 TEX101Q9BY14 249 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 SUDS3Q9H7L9 328 aaPredicted RBP13.13□□□□□ -0.31
PRKDC-206ENST00000536429 SHOC2Q9UQ13 582 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 EFR3BQ9Y2G0 817 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 R3HDM2Q9Y2K5 976 aaKnown RBP13.13□□□□□ -0.31
PRKDC-206ENST00000536429 MSRB2Q9Y3D2 182 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 SPO11Q9Y5K1 396 aa13.13□□□□□ -0.31
PRKDC-206ENST00000536429 DMXL2Q8TDJ6 3036 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 AURKAO14965 403 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 SLC4A1P02730 911 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 CEACAM5P06731 702 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 RBP3P10745 1247 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 MYCLP1P12525 358 aaPredicted RBP13.12□□□□□ -0.31
PRKDC-206ENST00000536429 CHRNA4P43681 627 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 GPR1P46091 355 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 WNT3AP56704 352 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 EIF3EP60228 445 aaKnown RBP13.12□□□□□ -0.31
PRKDC-206ENST00000536429 DPTQ07507 201 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 KLF1Q13351 362 aaPredicted RBP13.12□□□□□ -0.31
PRKDC-206ENST00000536429 XRCC4Q13426 336 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 SLC14A2Q15849 920 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 GUSBP11Q6P575 273 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 DOK6Q6PKX4 331 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 UNQ6494/PRO21346Q6UXR6 183 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 SLC35F3Q8IY50 421 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms