RNA–Protein interactions for RNA: ENST00000536287.2

RHBDL3-203, Transcript of rhomboid like 3, humanhuman

TSL 2 BASIC

Gene RHBDL3, Length 4,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-203ENST00000536287 DENND6AQ8IWF6 608 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 ZC3H7AQ8IWR0 971 aaKnown RBP11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 CLHC1Q8NHS4 586 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 TWIST2Q8WVJ9 160 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 HBEGFQ99075 208 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 PRMT5O14744 637 aaPredicted RBP11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 RNASEH1O60930 286 aaKnown RBP11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 PKMP14618 531 aaKnown RBP11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 HPGDP15428 266 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 NMBRP28336 390 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 GPD2P43304 727 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 TGM3Q08188 693 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 PAGE2BQ5JRK9 111 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 KBTBD8Q8NFY9 601 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 UPF1Q92900 1129 aaKnown RBP eCLIP11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 RHOBTB2Q9BYZ6 727 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 ZNF395Q9H8N7 513 aaPredicted RBP11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 ANKRD26Q9UPS8 1709 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 G3V2T6 193 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 H3BNX3 289 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 SLC28A1O00337 649 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 C4BPBP20851 252 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 HOXD13P35453 343 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 GRIA1P42261 906 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 CFAP52Q8N1V2 620 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 GRIN3AQ8TCU5 1115 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 LRTOMTQ8WZ04 291 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 OMA1Q96E52 524 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 ZDHHC6Q9H6R6 413 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 TMPRSS4Q9NRS4 437 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 NKX1-2Q9UD57 310 aaPredicted RBP11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 GSTK1Q9Y2Q3 226 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 SQORQ9Y6N5 450 aa11.95□□□□□ -0.5
RHBDL3-203ENST00000536287 HDCP19113 662 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 PTPN3P26045 913 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 SIM2Q14190 667 aaPredicted RBP11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 BTG3Q14201 252 aaPredicted RBP11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 ZNF460Q14592 562 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 CYP2A13Q16696 494 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 SETMARQ53H47 684 aaPredicted RBP11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 TMEM198Q66K66 360 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 SATL1Q86VE3 508 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 PROSER1Q86XN7 944 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 TRIM63Q969Q1 353 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 MCRS1Q96EZ8 462 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 COPS8Q99627 209 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 OSBPL10Q9BXB5 764 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 MRPL9Q9BYD2 267 aaKnown RBP11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 DPEP3Q9H4B8 488 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 CXorf21Q9HAI6 301 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 TIMMDC1Q9NPL8 285 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 SMPD3Q9NY59 655 aaPredicted RBP11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 ANKDD1BA6NHY2 528 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 H0YC42 278 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 PQBP1O60828 265 aaKnown RBP11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 PRDX6P30041 224 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 LIPEQ05469 1076 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 CDC73Q6P1J9 531 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 FAM151BQ6UXP7 276 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 TRPM4Q8TD43 1214 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 ATL1Q8WXF7 558 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 SOCS4Q8WXH5 440 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 MYDGFQ969H8 173 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 NLNQ9BYT8 704 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 EBF2Q9HAK2 575 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 PNPLA8Q9NP80 782 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 SLC17A6Q9P2U8 582 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 CHRNGP07510 517 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 SMAD3P84022 425 aaKnown RBP11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 COX10Q12887 443 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 PRKD1Q15139 912 aaPredicted RBP11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 DEPDC4Q8N2C3 294 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 GALNT15Q8N3T1 639 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 PPTC7Q8NI37 304 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 S100ZQ8WXG8 99 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 EZH1Q92800 747 aaPredicted RBP11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 ATP13A3Q9H7F0 1226 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 ERGIC3Q9Y282 383 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 TCAF1Q9Y4C2 921 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 CXorf49A8MYA2 514 aaPredicted RBP11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 HOXC6P09630 235 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 CYP2A6P11509 494 aaPredicted RBP11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 EPORP19235 508 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 L1CAMP32004 1257 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 RPS9P46781 194 aaKnown RBP11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 NDUFV1P49821 464 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 CDK9P50750 372 aaKnown RBP11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 SLC18A1P54219 525 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 SNRPD1P62314 119 aaKnown RBP11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 PITRM1Q5JRX3 1037 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 NEK10Q6ZWH5 1172 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 NIPA2Q8N8Q9 360 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 LEMD2Q8NC56 503 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 MCFD2Q8NI22 146 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 PTCD2Q8WV60 388 aaKnown RBP11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 HEXDCQ8WVB3 486 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 DCAKDQ8WVC6 231 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 GIT1Q9Y2X7 761 aa11.94□□□□□ -0.5
RHBDL3-203ENST00000536287 SNPHO15079 494 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms