RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 GSSP48637 474 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 PKNOX1P55347 436 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 ITGADQ13349 1161 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 LSM12Q3MHD2 195 aaKnown RBP17.97■□□□□ 0.47
RAB40C-203ENST00000535977 AARS2Q5JTZ9 985 aaKnown RBP17.97■□□□□ 0.47
RAB40C-203ENST00000535977 CST9Q5W186 159 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 MSANTD2Q6P1R3 559 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 UMODL1-AS1Q8N2C9 162 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 KYQ8NBH2 561 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 PCYOX1LQ8NBM8 494 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 TSPAN17Q96FV3 270 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 FAR2Q96K12 515 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 MRGPRX2Q96LB1 330 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 GPR78Q96P69 363 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 FBXO44Q9H4M3 255 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 OSER1Q9NX31 292 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 SLC8A2Q9UPR5 921 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 SCML2Q9UQR0 700 aa17.97■□□□□ 0.47
RAB40C-203ENST00000535977 TDRD15B5MCY1 1934 aaKnown RBP17.97■□□□□ 0.47
RAB40C-203ENST00000535977 GRID2O43424 1007 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 KDM1AO60341 852 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 DLX3O60479 287 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 PAPSS2O95340 614 aaPredicted RBP17.96■□□□□ 0.47
RAB40C-203ENST00000535977 CHRNGP07510 517 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 ARNTP27540 789 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 CTBP1Q13363 440 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 AFAP1L2Q8N4X5 818 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 FUBP3Q96I24 572 aaKnown RBP eCLIP17.96■□□□□ 0.47
RAB40C-203ENST00000535977 ELMO2Q96JJ3 720 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 OSBPL11Q9BXB4 747 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 TRPV6Q9H1D0 765 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 CCDC68Q9H2F9 335 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 HS3ST4Q9Y661 456 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 CFAP99D6REC4 459 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 PFDN6O15212 129 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 PMPCBO75439 489 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 PGK1P00558 417 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 ATP5F1P24539 256 aaPredicted RBP17.96■□□□□ 0.47
RAB40C-203ENST00000535977 FAM26DQ5JW98 314 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 ARTNQ5T4W7 220 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 DENND6AQ8IWF6 608 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 SIAEQ9HAT2 523 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 PALMDQ9NP74 551 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 XPR1Q9UBH6 696 aa17.96■□□□□ 0.47
RAB40C-203ENST00000535977 RHOQP17081 205 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 SLC1A2P43004 574 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 CLCN5P51795 746 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 MPP1Q00013 466 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 IKBKEQ14164 716 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 NFE2Q16621 373 aaPredicted RBP17.95■□□□□ 0.46
RAB40C-203ENST00000535977 FAM83EQ2M2I3 478 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 GPR107Q5VW38 600 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 ANKRD26P1Q6NSI1 321 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 USP13Q92995 863 aaPredicted RBP17.95■□□□□ 0.46
RAB40C-203ENST00000535977 NXNL1Q96CM4 212 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 CXorf21Q9HAI6 301 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 ZDHHC2Q9UIJ5 367 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 SEPT4O43236 478 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 AVPR1AP37288 418 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 WNT3AP56704 352 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 TRIM16LQ309B1 348 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 PIGGQ5H8A4 983 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 AGAP9Q5VTM2 703 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 KDELC1Q6UW63 502 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 BNC2Q6ZN30 1099 aaPredicted RBP17.95■□□□□ 0.46
RAB40C-203ENST00000535977 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.95■□□□□ 0.46
RAB40C-203ENST00000535977 HASPINQ8TF76 798 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 C8orf48Q96LL4 319 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 EHD1Q9H4M9 534 aa17.95■□□□□ 0.46
RAB40C-203ENST00000535977 CCDC78A2IDD5 438 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 CFLARO15519 480 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 MSI1O43347 362 aaKnown RBP17.94■□□□□ 0.46
RAB40C-203ENST00000535977 F7P08709 466 aaPredicted RBP17.94■□□□□ 0.46
RAB40C-203ENST00000535977 FGFR3P22607 806 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 TCEA1P23193 301 aaKnown RBP17.94■□□□□ 0.46
RAB40C-203ENST00000535977 GLRBP48167 497 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 PCYT1AP49585 367 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 GNA12Q03113 381 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 CEACAM7Q14002 265 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 ZNF470Q6ECI4 717 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 ZNF598Q86UK7 904 aaKnown RBP17.94■□□□□ 0.46
RAB40C-203ENST00000535977 CEP97Q8IW35 865 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 IMP4Q96G21 291 aaKnown RBP17.94■□□□□ 0.46
RAB40C-203ENST00000535977 SLC39A13Q96H72 371 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 FTHL17Q9BXU8 183 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 ZNF385DQ9H6B1 395 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 EML4Q9HC35 981 aaKnown RBP17.94■□□□□ 0.46
RAB40C-203ENST00000535977 ATP13A1Q9HD20 1204 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 NLRC5Q86WI3 1866 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 A0A087WXM4 84 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 A0A1W2PQH9 124 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 CLASP2O75122 1294 aaKnown RBP17.94■□□□□ 0.46
RAB40C-203ENST00000535977 TADA2AO75478 443 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 OAZ2O95190 189 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 RBP1P09455 135 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 JAK1P23458 1154 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 SERPINH1P50454 418 aaKnown RBP17.94■□□□□ 0.46
RAB40C-203ENST00000535977 TNK2Q07912 1038 aa17.94■□□□□ 0.46
RAB40C-203ENST00000535977 SF3B4Q15427 424 aaKnown RBP eCLIP17.94■□□□□ 0.465e-9■■■■■ 30.3
RAB40C-203ENST00000535977 IL23RQ5VWK5 629 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms