RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 LIG3P49916 1009 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 ZNF140P52738 457 aaPredicted RBP16.22■□□□□ 0.19
VAMP1-205ENST00000535927 VSNL1P62760 191 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 OLIG2Q13516 323 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 CNGA3Q16281 694 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 ANKRD20A4Q4UJ75 823 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 STEAP4Q687X5 459 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 KIAA0930Q6ICG6 404 aaPredicted RBP16.22■□□□□ 0.19
VAMP1-205ENST00000535927 LYSMD3Q7Z3D4 306 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 TECPR1Q7Z6L1 1165 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 ZBED8Q8IZ13 594 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 DENND6BQ8NEG7 585 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 FOXJ1Q92949 421 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 CAVIN3Q969G5 261 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 PKNOX2Q96KN3 472 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 COQ10AQ96MF6 247 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 HINFPQ9BQA5 517 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 CHRAC1Q9NRG0 131 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 TREX1Q9NSU2 369 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 ARGLU1Q9NWB6 273 aaPredicted RBP16.22■□□□□ 0.19
VAMP1-205ENST00000535927 C2orf42Q9NWW7 574 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 SYBUQ9NX95 663 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 SPO11Q9Y5K1 396 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 RPS6KL1Q9Y6S9 549 aa16.22■□□□□ 0.19
VAMP1-205ENST00000535927 IGHV1OR15-9A0A0B4J2B8 117 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 PFDN6O15212 129 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 SPINT1O43278 529 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 LZTS3O60299 673 aaPredicted RBP16.21■□□□□ 0.19
VAMP1-205ENST00000535927 LHCGRP22888 699 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 METAP1P53582 386 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 SEPT6Q14141 434 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 GPR33Q49SQ1 333 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 MSS51Q4VC12 460 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 TMEM259Q4ZIN3 620 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 SETMARQ53H47 684 aaPredicted RBP16.21■□□□□ 0.19
VAMP1-205ENST00000535927 FBXO36Q8NEA4 188 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 TOE1Q96GM8 510 aaKnown RBP16.21■□□□□ 0.19
VAMP1-205ENST00000535927 CDKN2AIPNLQ96HQ2 116 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 TTC1Q99614 292 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 ZSCAN5AQ9BUG6 496 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 SLC17A9Q9BYT1 436 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 SLC6A17Q9H1V8 727 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 FAM83DQ9H4H8 585 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 SERGEFQ9UGK8 458 aa16.21■□□□□ 0.19
VAMP1-205ENST00000535927 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.21■□□□□ 0.19
VAMP1-205ENST00000535927 V9GYY5 206 aaPredicted RBP16.21■□□□□ 0.19
VAMP1-205ENST00000535927 RIF1Q5UIP0 2472 aaKnown RBP16.21■□□□□ 0.18
VAMP1-205ENST00000535927 LATO43561 262 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 RPP40O75818 363 aaKnown RBP16.2■□□□□ 0.18
VAMP1-205ENST00000535927 ABHD2P08910 425 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 C6P13671 934 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 SPAM1P38567 509 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 DPP6P42658 865 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 PRAMEP78395 509 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 ITGA9Q13797 1035 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 ACOX1Q15067 660 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 ELF2Q15723 593 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 LYPLAL1Q5VWZ2 237 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 KIAA0895LQ68EN5 471 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 CERS6Q6ZMG9 384 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 CCDC25Q86WR0 208 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 MPP5Q8N3R9 675 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 MREGQ8N565 214 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.2■□□□□ 0.18
VAMP1-205ENST00000535927 OR4K2Q8NGD2 314 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 GSDMBQ8TAX9 411 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 AENQ8WTP8 325 aaKnown RBP16.2■□□□□ 0.18
VAMP1-205ENST00000535927 HEXDCQ8WVB3 486 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.2■□□□□ 0.18
VAMP1-205ENST00000535927 DTD2Q96FN9 168 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 TCF12Q99081 682 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 FUT8Q9BYC5 575 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 TXLNGYQ9BZA5 131 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 POLR3BQ9NW08 1133 aaPredicted RBP16.2■□□□□ 0.18
VAMP1-205ENST00000535927 ZSCAN32Q9NX65 697 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 NSMCE4AQ9NXX6 385 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 CYP8B1Q9UNU6 501 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 VPS9D1Q9Y2B5 631 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 HS3ST3A1Q9Y663 406 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 ARL5AQ9Y689 179 aa16.2■□□□□ 0.18
VAMP1-205ENST00000535927 A0A1W2PQU0 124 aa16.19■□□□□ 0.18
VAMP1-205ENST00000535927 MMP20O60882 483 aa16.19■□□□□ 0.18
VAMP1-205ENST00000535927 PIRTP0C851 137 aa16.19■□□□□ 0.18
VAMP1-205ENST00000535927 STX2P32856 288 aa16.19■□□□□ 0.18
VAMP1-205ENST00000535927 ACSL1P33121 698 aa16.19■□□□□ 0.18
VAMP1-205ENST00000535927 PMS2P54278 862 aa16.19■□□□□ 0.18
VAMP1-205ENST00000535927 CSTF1Q05048 431 aaKnown RBP16.19■□□□□ 0.18
VAMP1-205ENST00000535927 NAB1Q13506 487 aa16.19■□□□□ 0.18
VAMP1-205ENST00000535927 LONRF1Q17RB8 773 aa16.19■□□□□ 0.18
VAMP1-205ENST00000535927 ZNF284Q2VY69 593 aa16.19■□□□□ 0.18
VAMP1-205ENST00000535927 AARS2Q5JTZ9 985 aaKnown RBP16.19■□□□□ 0.18
VAMP1-205ENST00000535927 AFTPHQ6ULP2 937 aa16.19■□□□□ 0.18
VAMP1-205ENST00000535927 C3orf62Q6ZUJ4 267 aa16.19■□□□□ 0.18
VAMP1-205ENST00000535927 TSPAN33Q86UF1 283 aa16.19■□□□□ 0.18
VAMP1-205ENST00000535927 MAML2Q8IZL2 1156 aaPredicted RBP16.19■□□□□ 0.18
VAMP1-205ENST00000535927 TRAM1L1Q8N609 369 aa16.19■□□□□ 0.18
VAMP1-205ENST00000535927 GPR150Q8NGU9 434 aa16.19■□□□□ 0.18
VAMP1-205ENST00000535927 CDKL2Q92772 493 aa16.19■□□□□ 0.18
VAMP1-205ENST00000535927 ULK4Q96C45 1275 aa16.19■□□□□ 0.18
VAMP1-205ENST00000535927 IRF2BPLQ9H1B7 796 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms