RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 NUP85Q9BW27 656 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 ISCUQ9H1K1 167 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 NOD2Q9HC29 1040 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 NT5MQ9NPB1 228 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 ZNHIT6Q9NWK9 470 aaKnown RBP13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 LUC7L2Q9Y383 392 aaKnown RBP13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 CHD5Q8TDI0 1954 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 SHROOM3Q8TF72 1996 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 ITPR1Q14643 2758 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 A0A1B0GTH6 734 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 A0A1W2PQM1 296 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 STMND1H3BQB6 276 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 AGRPO00253 132 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 DDX3XO00571 662 aaKnown RBP eCLIP13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 HTRA2O43464 458 aaPredicted RBP13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 PGLSO95336 258 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 KRT7P08729 469 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 RARAP10276 462 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 HGFP14210 728 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 TEAD1P28347 426 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 ETV3P41162 512 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 MAXP61244 160 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 TRA2AQ13595 282 aaKnown RBP eCLIP13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 IFI16Q16666 785 aaKnown RBP13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 CCDC70Q6NSX1 233 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 APTXQ7Z2E3 356 aaKnown RBP13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 B3GNT8Q7Z7M8 397 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 IL22RA1Q8N6P7 574 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 OR10G6Q8NH81 332 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 GPBAR1Q8TDU6 330 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 CPLX3Q8WVH0 158 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 SNRNP27Q8WVK2 155 aaKnown RBP13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 CTNNBL1Q8WYA6 563 aaPredicted RBP13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 SPOCK2Q92563 424 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 SYN2Q92777 582 aaPredicted RBP13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 SH3KBP1Q96B97 665 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 COQ10AQ96MF6 247 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 OR2M4Q96R27 311 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 SEMA3CQ99985 751 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 MAK16Q9BXY0 300 aaKnown RBP13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 TEX101Q9BY14 249 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 ADGRE3Q9BY15 652 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 KCNK4Q9NYG8 393 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 PKD2L2Q9NZM6 624 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 TAAR2Q9P1P5 351 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 CTTNBP2NLQ9P2B4 639 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 AMACRQ9UHK6 382 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 PNMA8BQ9ULN7 279 aaPredicted RBP13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 SUFUQ9UMX1 484 aa13.22□□□□□ -0.29
CLSTN3-205ENST00000535452 A0A1W2PQJ5 194 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 B8ZZF3 427 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 DUX1O43812 170 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 SLC28A2O43868 658 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 NOBOXO60393 691 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 MAFKO60675 156 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 ITGB2P05107 769 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 IVLP07476 585 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 PLA2G2AP14555 144 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 CTPS1P17812 591 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 PTMSP20962 102 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 GPLD1P80108 840 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 ZBED6P86452 979 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 DPTQ07507 201 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 LY6DQ14210 128 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 PDK2Q15119 407 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 KIAA1614Q5VZ46 1190 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 LRRC66Q68CR7 880 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 PRICKLE2Q7Z3G6 844 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 NRSN1Q8IZ57 195 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 NIPA2Q8N8Q9 360 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 CCNYQ8ND76 341 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 AGBL5Q8NDL9 886 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 EXD1Q8NHP7 514 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 USP7Q93009 1102 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 KIAA1143Q96AT1 154 aaPredicted RBP13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 SYT11Q9BT88 431 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 LGR4Q9BXB1 951 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 ASPSCR1Q9BZE9 553 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 B3GNT4Q9C0J1 378 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 RABGEF1Q9UJ41 708 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 ACSL6Q9UKU0 697 aa13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.21□□□□□ -0.29
CLSTN3-205ENST00000535452 NPIPB15A6NHN6 443 aaPredicted RBP13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 ECEL1O95672 775 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 PDX1P52945 283 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 RAB15P59190 212 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 RPL26P61254 145 aaKnown RBP13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 SKOR1P84550 965 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 TRAF2Q12933 501 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 ALKBH5Q6P6C2 394 aaKnown RBP13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 Q6ZVL8 140 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 MARK2Q7KZI7 788 aaKnown RBP13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 ZNF765Q7L2R6 523 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 HSD11B1LQ7Z5J1 315 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 PHYKPLQ8IUZ5 450 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 RAVER1Q8IY67 606 aaKnown RBP13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 ARFGAP1Q8N6T3 406 aa13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 ZNF564Q8TBZ8 553 aaPredicted RBP13.2□□□□□ -0.3
CLSTN3-205ENST00000535452 TAAR9Q96RI9 348 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms