RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ZNF711Q9Y462 761 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 SPO11Q9Y5K1 396 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 GIPC1O14908 333 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 SDC3O75056 442 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 METTL18O95568 372 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 AGTP01019 485 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 CSF2P04141 144 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 ITGAVP06756 1048 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 HOXC4P09017 264 aaPredicted RBP22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 NME1P15531 152 aaKnown RBP22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 HLA-DPA1P20036 260 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 MSNP26038 577 aaKnown RBP22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 TEAD1P28347 426 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 STIP1P31948 543 aaKnown RBP22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 SPINT3P49223 89 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 NOVA1P51513 510 aaKnown RBP22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 PRPSAP1Q14558 356 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 LONRF2Q1L5Z9 754 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 PARP6Q2NL67 630 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 PSAPL1Q6NUJ1 521 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 DRICH1Q6PGQ1 229 aaPredicted RBP22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 ARHGEF18Q6ZSZ5 1173 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 TMC3Q7Z5M5 1100 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 NLRP8Q86W28 1048 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 RASGEF1CQ8N431 466 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 SLC25A41Q8N5S1 370 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 SETD7Q8WTS6 366 aaKnown RBP22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 SCAMP4Q969E2 229 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 PBKQ96KB5 322 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 WDR24Q96S15 920 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 FICDQ9BVA6 458 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 SLC32A1Q9H598 525 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 ZFYVE1Q9HBF4 777 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 SHOC2Q9UQ13 582 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 ZNF148Q9UQR1 794 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 ZKSCAN5Q9Y2L8 839 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 TMEM131Q92545 1883 aa22.68■■□□□ 1.22
SFSWAP-204ENST00000535399 CACNA1AO00555 2505 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 SPTBN2O15020 2390 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 PIAS2O75928 621 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 SOD1P00441 154 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 CEACAM1P13688 526 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 TSHRP16473 764 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 DGKAP23743 735 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 GRK6P43250 576 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 KIAA1024LP59773 190 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 PPM1JQ5JR12 505 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 RANBP10Q6VN20 620 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 BAHD1Q8TBE0 780 aaPredicted RBP22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 CCHCR1Q8TD31 782 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 AP2M1Q96CW1 435 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 PPP1R2P1Q96PQ5 205 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 SRPK1Q96SB4 655 aaKnown RBP22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 FSD1LQ9BXM9 530 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 WDR26Q9H7D7 661 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 UCKL1Q9NWZ5 548 aa22.67■■□□□ 1.22
SFSWAP-204ENST00000535399 RGSL1A5PLK6 1076 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 AURKAO14965 403 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 FGF1P05230 155 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 JUNDP17535 347 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 HTR1BP28222 390 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 TNNT3P45378 269 aaPredicted RBP22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 HNRNPKP61978 463 aaKnown RBP eCLIP22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 OLIG2Q13516 323 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 P3H1Q32P28 736 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 KCTD11Q693B1 232 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 RAET1GQ6H3X3 334 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 ENPP7Q6UWV6 458 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 NYAP1Q6ZVC0 841 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 HEATR4Q86WZ0 1026 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 SLC25A45Q8N413 288 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 RHBDD1Q8TEB9 315 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 MS4A14Q96JA4 679 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 RIOK2Q9BVS4 552 aaKnown RBP22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 LGR4Q9BXB1 951 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 TEX101Q9BY14 249 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 TCEAL2Q9H3H9 227 aaPredicted RBP22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 PKD2L2Q9NZM6 624 aa22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 TTC7AQ9ULT0 858 aaPredicted RBP22.66■■□□□ 1.22
SFSWAP-204ENST00000535399 CACNB4O00305 520 aaPredicted RBP22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 ALG11Q2TAA5 492 aa22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 INAVAQ3KP66 663 aa22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 FAXCQ5TGI0 409 aa22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 KCTD16Q68DU8 428 aa22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 ADAMTSL4Q6UY14 1074 aa22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 PHACTR4Q8IZ21 702 aa22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 TTC30BQ8N4P2 665 aa22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 PRELID2Q8N945 189 aa22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 COG1Q8WTW3 980 aa22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 WDR92Q96MX6 357 aa22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 OSBPL9Q96SU4 736 aa22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 AGAP2Q99490 1192 aa22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 APOL2Q9BQE5 337 aa22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 GPR63Q9BZJ6 419 aa22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 TRABDQ9H4I3 376 aa22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 SNX12Q9UMY4 172 aa22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 DRG1Q9Y295 367 aaKnown RBP22.65■■□□□ 1.22
SFSWAP-204ENST00000535399 GOLGA6CA6NDK9 693 aa22.64■■□□□ 1.21
SFSWAP-204ENST00000535399 GOLGA6BA6NDN3 693 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms