RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 C9orf16Q9BUW7 83 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 CHMP1AQ9HD42 196 aaPredicted RBP12.63□□□□□ -0.39
SPG11-203ENST00000535302 GMIPQ9P107 970 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 IKZF2Q9UKS7 526 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 hCG_1818297A0A087WSY0 165 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 RASGRP1O95267 797 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 MT-ND1P03886 318 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 ARHGDIBP52566 201 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 MSLNQ13421 630 aaPredicted RBP12.63□□□□□ -0.39
SPG11-203ENST00000535302 C9orf57Q5W0N0 161 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 UNC93AQ86WB7 457 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 FAM71AQ8IYT1 594 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 STK40Q8N2I9 435 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 MAGEC3Q8TD91 643 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 LMLNQ96KR4 655 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 LPIN3Q9BQK8 851 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 FAM105AQ9NUU6 356 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 ASF1AQ9Y294 204 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 OAS3Q9Y6K5 1087 aaKnown RBP12.63□□□□□ -0.39
SPG11-203ENST00000535302 SPATA31C2B4DYI2 1134 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 SEC24AO95486 1093 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 CSN2P05814 226 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 UQCRBP14927 111 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 BMP7P18075 431 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 FAM187BQ17R55 369 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 TOR1AIP1Q5JTV8 583 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 WASHC2DQ5SRD0 308 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 FAM91A1Q658Y4 838 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 LRRC55Q6ZSA7 311 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 IKBIPQ70UQ0 350 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 DCBLD1Q8N8Z6 715 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 ATAD1Q8NBU5 361 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 RACGAP1Q9H0H5 632 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 AK5Q9Y6K8 562 aa12.63□□□□□ -0.39
SPG11-203ENST00000535302 EIF2S3P41091 472 aaKnown RBP12.62□□□□□ -0.39
SPG11-203ENST00000535302 AUHQ13825 339 aaKnown RBP12.62□□□□□ -0.39
SPG11-203ENST00000535302 HSDL1Q3SXM5 330 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 PREPLQ4J6C6 727 aaPredicted RBP12.62□□□□□ -0.39
SPG11-203ENST00000535302 RGMBQ6NW40 437 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 ANKFN1Q8N957 763 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 ZNF248Q8NDW4 579 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 VAT1Q99536 393 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 DPEP3Q9H4B8 488 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 XPR1Q9UBH6 696 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 USP32Q8NFA0 1604 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 ANXA6P08133 673 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 GIMD1P0DJR0 217 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 PSMD8P48556 350 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 NRG3P56975 720 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 NOMO3P69849 1222 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 SF1Q15637 639 aaKnown RBP12.62□□□□□ -0.39
SPG11-203ENST00000535302 GPR158Q5T848 1215 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 SLC47A1Q96FL8 570 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 ELAC1Q9H777 363 aaKnown RBP12.62□□□□□ -0.39
SPG11-203ENST00000535302 MBD2Q9UBB5 411 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 MST1RQ04912 1400 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 HSD3B2P26439 372 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 SP140Q13342 867 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 IL18Q14116 193 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 INO80DQ53TQ3 878 aaPredicted RBP12.62□□□□□ -0.39
SPG11-203ENST00000535302 LRRC73Q5JTD7 316 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 SAMD4BQ5PRF9 694 aaKnown RBP12.62□□□□□ -0.39
SPG11-203ENST00000535302 DLK2Q6UY11 383 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 RALGPS2Q86X27 583 aaPredicted RBP12.62□□□□□ -0.39
SPG11-203ENST00000535302 CADM2Q8N3J6 435 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 SNX15Q9NRS6 342 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 CLIC5Q9NZA1 410 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 ITGA2BP08514 1039 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 ICAM3P32942 547 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 CRYBB1P53674 252 aaPredicted RBP12.62□□□□□ -0.39
SPG11-203ENST00000535302 SEMG2Q02383 582 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 TAB1Q15750 504 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 MTX3Q5HYI7 312 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 ZNF615Q8N8J6 731 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 APBB2Q92870 758 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 KLK6Q92876 244 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 HPS1Q92902 700 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 SLC17A7Q9P2U7 560 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 STARD13Q9Y3M8 1113 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 SLC15A5A6NIM6 579 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 C9JVG2 144 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 C1QTNF3-AMACRE9PGA6 284 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 FKTNO75072 461 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 PPM1AP35813 382 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 AP2S1P53680 142 aaPredicted RBP12.62□□□□□ -0.39
SPG11-203ENST00000535302 QPRTQ15274 297 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 DLG2Q15700 870 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 SH3RF1Q7Z6J0 888 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 ADHFE1Q8IWW8 467 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 OR4L1Q8NH43 312 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 TSEN15Q8WW01 171 aaKnown RBP12.62□□□□□ -0.39
SPG11-203ENST00000535302 CHIAQ9BZP6 476 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 SLIT1O75093 1534 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 UBE2QL1A1L167 161 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 TREHO43280 583 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 STBD1O95210 358 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 ELFN1P0C7U0 828 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 ACAP2Q15057 778 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 SLC34A3Q8N130 599 aa12.62□□□□□ -0.39
SPG11-203ENST00000535302 OR52J3Q8NH60 311 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms