RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 PDXPQ96GD0 296 aa13.79□□□□□ -0.2
TMEM258-203ENST00000535297 TEKT5Q96M29 485 aa13.79□□□□□ -0.2
TMEM258-203ENST00000535297 SMIM14Q96QK8 99 aa13.79□□□□□ -0.2
TMEM258-203ENST00000535297 TRIB3Q96RU7 358 aa13.79□□□□□ -0.2
TMEM258-203ENST00000535297 RBM15Q96T37 977 aaKnown RBP eCLIP13.79□□□□□ -0.2
TMEM258-203ENST00000535297 VAT1Q99536 393 aa13.79□□□□□ -0.2
TMEM258-203ENST00000535297 DESI2Q9BSY9 194 aa13.79□□□□□ -0.2
TMEM258-203ENST00000535297 TEX101Q9BY14 249 aa13.79□□□□□ -0.2
TMEM258-203ENST00000535297 ADGRE3Q9BY15 652 aa13.79□□□□□ -0.2
TMEM258-203ENST00000535297 GLOD4Q9HC38 313 aa13.79□□□□□ -0.2
TMEM258-203ENST00000535297 FGF22Q9HCT0 170 aa13.79□□□□□ -0.2
TMEM258-203ENST00000535297 U3KQA8 63 aa13.79□□□□□ -0.2
TMEM258-203ENST00000535297 USP24Q9UPU5 2620 aa13.79□□□□□ -0.2
TMEM258-203ENST00000535297 AKAP13Q12802 2813 aa13.79□□□□□ -0.2
TMEM258-203ENST00000535297 KNTC1P50748 2209 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 TMEM202A6NGA9 273 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 ANKRD66B4E2M5 251 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 TNFP01375 233 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 PYGLP06737 847 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 GP1BAP07359 652 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 CTSEP14091 401 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 CETN2P41208 172 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 CDK3Q00526 305 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 E2F1Q01094 437 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 PTSQ03393 145 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 WASHC5Q12768 1159 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 XRCC4Q13426 336 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 C1orf61Q13536 156 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 NOMO1Q15155 1222 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 ST3GAL2Q16842 350 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 LVRNQ6Q4G3 990 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 B4GALNT4Q76KP1 1039 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 ZC3H18Q86VM9 953 aaKnown RBP13.78□□□□□ -0.2
TMEM258-203ENST00000535297 NLRP8Q86W28 1048 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 HEATR4Q86WZ0 1026 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 NRSN1Q8IZ57 195 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 KDF1Q8NAX2 398 aaPredicted RBP13.78□□□□□ -0.2
TMEM258-203ENST00000535297 OR1E3Q8WZA6 343 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 GLMNQ92990 594 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 HAUS1Q96CS2 278 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 MLPHQ9BV36 600 aaPredicted RBP13.78□□□□□ -0.2
TMEM258-203ENST00000535297 BOCQ9BWV1 1114 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 LGR4Q9BXB1 951 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 HEMGNQ9BXL5 484 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 OSBPL8Q9BZF1 889 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 CLPBQ9H078 707 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 AMFRQ9UKV5 643 aa13.78□□□□□ -0.2
TMEM258-203ENST00000535297 C1orf232A0A0U1RR37 186 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 MACROD2A1Z1Q3 448 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 GOLGA6CA6NDK9 693 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 GOLGA6BA6NDN3 693 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 MIF4GDA9UHW6 222 aaKnown RBP13.77□□□□□ -0.21
TMEM258-203ENST00000535297 YY2O15391 372 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 GOLGA6DP0CG33 693 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 GPR1P46091 355 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 RPIAP49247 311 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 CDK18Q07002 472 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 GALNT3Q14435 633 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 NR0B2Q15466 257 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 HES3Q5TGS1 186 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 CCDC181Q5TID7 509 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 ADAMTSL4Q6UY14 1074 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 RD3Q7Z3Z2 195 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 PEX26Q7Z412 305 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 GKN2Q86XP6 184 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 CACTIN-AS1Q8N1I8 211 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 UBL4BQ8N7F7 174 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 CCDC112Q8NEF3 446 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 HTR3CQ8WXA8 447 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 SCG3Q8WXD2 468 aaKnown RBP13.77□□□□□ -0.21
TMEM258-203ENST00000535297 ALG3Q92685 438 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 AP2M1Q96CW1 435 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 FRMD8Q9BZ67 464 aaPredicted RBP13.77□□□□□ -0.21
TMEM258-203ENST00000535297 ABCG8Q9H221 673 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 GOLGA6AQ9NYA3 693 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 KLHL8Q9P2G9 620 aaPredicted RBP13.77□□□□□ -0.21
TMEM258-203ENST00000535297 TRIM10Q9UDY6 481 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 CD84Q9UIB8 345 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 DOLKQ9UPQ8 538 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 SPEGQ15772 3267 aa13.77□□□□□ -0.21
TMEM258-203ENST00000535297 CACNA1BQ00975 2339 aa13.76□□□□□ -0.21
TMEM258-203ENST00000535297 A0A0U1RQS6 177 aa13.76□□□□□ -0.21
TMEM258-203ENST00000535297 PRSS38A1L453 326 aa13.76□□□□□ -0.21
TMEM258-203ENST00000535297 RGSL1A5PLK6 1076 aa13.76□□□□□ -0.21
TMEM258-203ENST00000535297 CLDN7O95471 211 aa13.76□□□□□ -0.21
TMEM258-203ENST00000535297 SOD1P00441 154 aa13.76□□□□□ -0.21
TMEM258-203ENST00000535297 CELA2BP08218 269 aaPredicted RBP13.76□□□□□ -0.21
TMEM258-203ENST00000535297 NFKB1P19838 968 aa13.76□□□□□ -0.21
TMEM258-203ENST00000535297 CD68P34810 354 aaPredicted RBP13.76□□□□□ -0.21
TMEM258-203ENST00000535297 INSM1Q01101 510 aaPredicted RBP13.76□□□□□ -0.21
TMEM258-203ENST00000535297 CDKN3Q16667 212 aa13.76□□□□□ -0.21
TMEM258-203ENST00000535297 KCTD16Q68DU8 428 aa13.76□□□□□ -0.21
TMEM258-203ENST00000535297 RFLNAQ6ZTI6 216 aa13.76□□□□□ -0.21
TMEM258-203ENST00000535297 NYAP1Q6ZVC0 841 aa13.76□□□□□ -0.21
TMEM258-203ENST00000535297 CDKL3Q8IVW4 592 aaPredicted RBP13.76□□□□□ -0.21
TMEM258-203ENST00000535297 SLC35F3Q8IY50 421 aa13.76□□□□□ -0.21
TMEM258-203ENST00000535297 RNF10Q8N5U6 811 aaKnown RBP13.76□□□□□ -0.21
TMEM258-203ENST00000535297 SPATA22Q8NHS9 363 aa13.76□□□□□ -0.21
TMEM258-203ENST00000535297 IFI44Q8TCB0 444 aa13.76□□□□□ -0.21
TMEM258-203ENST00000535297 CCHCR1Q8TD31 782 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms