RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 ASTE1Q2TB18 679 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 CFAP58Q5T655 872 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 ALG1LQ6GMV1 187 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 ESRP1Q6NXG1 681 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 PNCKQ6P2M8 343 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 OGFOD3Q6PK18 319 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 LRRC49Q8IUZ0 686 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 HID1Q8IV36 788 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 GPR156Q8NFN8 814 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 WDR48Q8TAF3 677 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 ZNF564Q8TBZ8 553 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 CPLX3Q8WVH0 158 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 NAT6Q93015 286 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 WDR92Q96MX6 357 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 LGR4Q9BXB1 951 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 NOD2Q9HC29 1040 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 GEMIN8Q9NWZ8 242 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 SEPT10Q9P0V9 454 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 B4GALT6Q9UBX8 382 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 RABGEF1Q9UJ41 708 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 ANAPC7Q9UJX3 599 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 PADI4Q9UM07 663 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 LUC7L2Q9Y383 392 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 PCDHGC4Q9Y5F7 938 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 PCDHGA4Q9Y5G9 962 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 MYO1FO00160 1098 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 PLD2O14939 933 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 FZD6O60353 706 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 HEXIM1O94992 359 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 TNFP01375 233 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 CASP14P31944 242 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 SERPINB6P35237 376 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 CCR10P46092 362 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 CDH6P55285 790 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 TPM4P67936 248 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 TRAF2Q12933 501 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 MMRN1Q13201 1228 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 SPIDRQ14159 915 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 DPYSL3Q14195 570 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 IHHQ14623 411 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 PAFAH1B3Q15102 231 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 CNGA3Q16281 694 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 ATP13A4Q4VNC1 1196 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 CCDC122Q5T0U0 273 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 VASH2Q86V25 355 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 GKN2Q86XP6 184 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 CPNE8Q86YQ8 564 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 FBXO39Q8N4B4 442 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 ARL10Q8N8L6 244 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 KYQ8NBH2 561 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 OR56A4Q8NGH8 313 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 ATL2Q8NHH9 583 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 PCDH19Q8TAB3 1148 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 PIH1D2Q8WWB5 315 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 OR1E3Q8WZA6 343 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 MAML1Q92585 1016 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 FATE1Q969F0 183 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 FAF2Q96CS3 445 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 SCRN2Q96FV2 425 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 PDXPQ96GD0 296 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 MCCC1Q96RQ3 725 aaPredicted RBP10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 CCDC3Q9BQI4 270 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 EPB41L5Q9HCM4 733 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 FGF22Q9HCT0 170 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 KCTD5Q9NXV2 234 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 IFNKQ9P0W0 207 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 KLQ9UEF7 1012 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 PHTF1Q9UMS5 762 aa10.07□□□□□ -0.8
CLSTN3-203ENST00000534830 A0A1W2PQM1 296 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 A8MX80 341 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 PSMD11O00231 422 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 MFSD11O43934 449 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 PGLSO95336 258 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 FUCA1P04066 466 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 LIPCP11150 499 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 CTSEP14091 401 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 LHCGRP22888 699 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 TEAD1P28347 426 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 VIPR1P32241 457 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 GARSP41250 739 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 MMP13P45452 471 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 TAS2R40P59535 323 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 MAXP61244 160 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 GALNT2Q10471 571 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 ZNF235Q14590 738 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 SLC18A3Q16572 532 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 ANKRD20A8PQ5CZ79 823 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 MARC1Q5VT66 337 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 NCBP2-AS2Q69YL0 99 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 RAB11FIP2Q7L804 512 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 TECPR1Q7Z6L1 1165 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 C17orf82Q86X59 251 aaPredicted RBP10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 ATPAF2Q8N5M1 289 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 OR6C4Q8NGE1 309 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 SCG3Q8WXD2 468 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 TSGA13Q96PP4 275 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 TEX101Q9BY14 249 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 XPO4Q9C0E2 1151 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 MRPL40Q9NQ50 206 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 UVRAGQ9P2Y5 699 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms